myRT

myRT report for GCA_000437715.1_MGS290

Download annotations/find similar RTs

Seq: FR898808.1 Catenibacterium sp. CAG:290 genomic scaffold, scf77, whole genome shotgun sequence (49534 bp)
Overview 1 RT 1: 10156-19280 bp Neighborhood of RT #1 [10156, 19282] agmatine_aguB Abi_2 RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_4 INT_RitA_C_like RVT-GII PRK10621 rpsI Feature: gene Location: 10156-11031 bp Feature: domain Description: agmatine_aguB Location: 10168-11014 bp Feature: domain Description: agmatine_aguB Location: 1 01 68-1 1 01 4 bp Feature: gene Location: 11142-12077 bp Feature: domain Description: Abi_2 Location: 11256-11865 bp Feature: domain Description: Abi_2 Location: 1 1 256-1 1 865 bp Feature: gene Location: 12452-13099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12458-12626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2458-1 2626 bp Feature: domain Description: GIIM Note: maturase Location: 12686-12893 bp Feature: domain Description: GIIM Note: maturase Location: 1 2686-1 2893 bp Feature: gene Location: 13259-14266 bp Feature: domain Description: Phage_int_SAM_1 Location: 13304-13550 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 3304-1 3550 bp Feature: domain Description: INT_RitC_C_like Location: 13634-14183 bp Feature: domain Description: INT_RitC_C_like Location: 1 3634-1 41 83 bp Feature: gene Location: 14253-15080 bp Feature: domain Description: INT_RitB_C_like Location: 14439-15024 bp Feature: domain Description: INT_RitB_C_like Location: 1 4439-1 5024 bp Feature: gene Location: 15208-16455 bp Feature: domain Description: Phage_int_SAM_4 Location: 15559-15790 bp Feature: domain Description: Phage_int_SAM_4 Location: 1 5559-1 5790 bp Feature: domain Description: INT_RitA_C_like Location: 15874-16417 bp Feature: domain Description: INT_RitA_C_like Location: 1 5874-1 641 7 bp Feature: gene Location: 16565-17203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16766-17150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6766-1 71 50 bp Feature: gene Location: 17926-18672 bp Feature: domain Description: PRK10621 Location: 17947-18661 bp Feature: domain Description: PRK1 0621 Location: 1 7947-1 8661 bp Feature: gene Location: 18890-19282 bp Feature: domain Description: rpsI Location: 18893-19280 bp Feature: domain Description: rpsI Location: 1 8893-1 9280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT agmatine_aguB (TIGR03381), Abi_2 (pfam07751), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), Phage_int_SAM_4 (pfam13495), INT_RitA_C_like (cd01188), PRK10621 (hypothetical protein; Provisional)
rpsI (PRK00132)