myRT

myRT report for GCA_000437995.1_MGS40

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Seq: FR901298.1 Bacteroides thetaiotaomicron CAG:40 genomic scaffold, scf261, whole genome shotgun sequence (240455 bp)
Overview 1 RT 1: 95399-105368 bp 2 RT 2: 175633-180516 bp Neighborhood of RT #1 [95399, 105415] RVT-Retrons DNA2 MTES_1575 DUF3320 DUF4011 DEXXQc_SF1 DEXXQc_SF1 SF1_C_Upf1 Neighborhood of RT #2 [175633, 180516] RVT-UG17 SLATT_5 Feature: gene Location: 95399-95599 bp Feature: gene Location: 96001-98187 bp Feature: gene Location: 98392-99525 bp Ori: CDE78548.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98716-99268 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9871 6-99268 bp Feature: gene Location: 99559-100926 bp Ori: CDE78549.1 Feature: domain Description: DNA2 Location: 99625-99907 bp Feature: domain Description: DNA2 Location: 99625-99907 bp Feature: domain Description: MTES_1575 Location: 99964-100252 bp Feature: domain Description: MTES_1 575 Location: 99964-1 00252 bp Feature: domain Description: DUF3320 Location: 100432-100576 bp Feature: domain Description: DUF3320 Location: 1 00432-1 00576 bp Feature: gene Location: 100895-105415 bp Ori: CDE78550.1 Feature: domain Description: DUF4011 Location: 102050-102563 bp Feature: domain Description: DUF401 1 Location: 1 02050-1 02563 bp Feature: domain Description: DEXXQc_SF1 Location: 102902-103502 bp Feature: domain Description: DEXXQc_SF1 Location: 1 02902-1 03502 bp Feature: domain Description: DEXXQc_SF1 Location: 104339-105089 bp Feature: domain Description: DEXXQc_SF1 Location: 1 04339-1 05089 bp Feature: domain Description: SF1_C_Upf1 Location: 105098-105368 bp Feature: domain Description: SF1 _C_Upf1 Location: 1 05098-1 05368 bp Feature: gene Location: 175633-175848 bp Feature: gene Location: 176472-177086 bp Feature: gene Location: 177304-178806 bp Ori: CDE78646.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 177637-178228 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 77637-1 78228 bp Feature: gene Location: 178818-179405 bp Ori: CDE78648.1 Feature: domain Description: SLATT_5 Location: 178830-179394 bp Feature: domain Description: SLATT_5 Location: 1 78830-1 79394 bp Feature: gene Location: 180370-180516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DNA2 (COG1112), MTES_1575 (pfam18741), DUF3320 (pfam11784), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), RVT-UG17, SLATT_5 (pfam18160)