myRT

myRT report for GCA_000438175.1_MGS439

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Seq: FR900476.1 Fusobacterium sp. CAG:439 genomic scaffold, scf181, whole genome shotgun sequence (39191 bp)
Overview 1 RT 1: 28250-35213 bp Neighborhood of RT #1 [28250, 35341] DUF4186 RVT-UG2 McrB COG4127 McrB McrBC Feature: gene Location: 28250-28996 bp Feature: gene Location: 29177-29521 bp Ori: CDE59893.1 Feature: domain Description: DUF4186 Location: 29183-29504 bp Feature: domain Description: DUF41 86 Location: 291 83-29504 bp Feature: gene Location: 29935-31374 bp Ori: CDE59894.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 30151-31003 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 301 51 -31 003 bp Feature: gene Location: 31401-34031 bp Ori: CDE59899.1 Feature: domain Description: McrB Location: 32661-32901 bp Feature: domain Description: McrB Location: 32661 -32901 bp Feature: domain Description: COG4127 Location: 33180-33354 bp Feature: domain Description: COG41 27 Location: 331 80-33354 bp Feature: domain Description: McrB Location: 33462-33924 bp Feature: domain Description: McrB Location: 33462-33924 bp Feature: gene Location: 34034-35341 bp Ori: CDE59904.1 Feature: domain Description: McrBC Location: 34244-35213 bp Feature: domain Description: McrBC Location: 34244-3521 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4186 (pfam13811), RVT-UG2, McrB (COG4054), COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), McrBC (pfam10117)

Seq: FR900457.1 Fusobacterium sp. CAG:439 genomic scaffold, scf131, whole genome shotgun sequence (39020 bp)
Overview 1 RT 1: 1198-5533 bp Neighborhood of RT #1 [1198, 5538] PRK09319 PRK09289 RVT-DGRs HTH_XRE PulG DUF1566 Feature: gene Location: 1198-2406 bp Ori: CDE62163.1 Feature: domain Description: PRK09319 Location: 1207-2404 bp Feature: domain Description: PRK09319 Location: 12 07-2 404 bp Feature: gene Location: 2408-3001 bp Ori: CDE62164.1 Feature: domain Description: PRK09289 Location: 2411-2960 bp Feature: domain Description: PRK092 89 Location: 2 411-2 960 bp Feature: gene Location: 3073-4230 bp Ori: CDE62165.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3259-3940 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32 59-3940 bp Feature: gene Location: 4169-4486 bp Ori: CDE62166.1 Feature: domain Description: HTH_XRE Location: 4196-4361 bp Feature: domain Description: HTH_XRE Location: 4196-4361 bp Feature: gene Location: 4630-5538 bp Ori: CDE62167.1 Feature: domain Description: PulG Location: 4642-4813 bp Feature: domain Description: PulG Location: 4642 -4813 bp Feature: domain Description: DUF1566 Location: 5305-5533 bp Feature: domain Description: DUF1566 Location: 5305-5533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09319 (bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase RibB/GTP cyclohydrolase II RibA), PRK09289 (riboflavin synthase), RVT-DGRs, HTH_XRE (smart00530), PulG (pfam11773), DUF1566 (pfam07603)

Seq: FR900422.1 Fusobacterium sp. CAG:439 genomic scaffold, scf54, whole genome shotgun sequence (15836 bp)
Overview 1 RT 1: 9826-14381 bp Neighborhood of RT #1 [9826, 14398] RVT-Retrons MrnC Feature: gene Location: 9826-10398 bp Feature: gene Location: 10491-11852 bp Feature: gene Location: 11864-12997 bp Ori: CDE60914.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12095-12719 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12095-12719 bp Feature: gene Location: 13387-13950 bp Feature: gene Location: 14036-14398 bp Ori: CDE60917.1 Feature: domain Description: MrnC Location: 14051-14381 bp Feature: domain Description: MrnC Location: 14051-143 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, MrnC (COG1939)