myRT

myRT report for GCA_000438515.2_3SKRG

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Seq: ATKJ02000007.1 Enterococcus raffinosus cftri2200 contig_7, whole genome shotgun sequence (113693 bp)
Overview 1 RT 1: 88598-94138 bp Neighborhood of RT #1 [88598, 94164] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 88598-88942 bp Feature: domain Description: RelB_DinJ Location: 88808-88934 bp Feature: domain Description: RelB_DinJ Location: 88808-88934 bp Feature: gene Location: 88996-90027 bp Feature: domain Description: FtsK_SpoIIIE Location: 89668-89908 bp Feature: domain Description: FtsK_SpoIIIE Location: 89668-89908 bp Feature: gene Location: 90621-92495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90987-91683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90987-91 683 bp Feature: domain Description: HNHc Note: nucleases Location: 92223-92382 bp Feature: domain Description: HNHc Note: nucleases Location: 92223-92382 bp Feature: gene Location: 92597-92977 bp Feature: domain Description: FtsK Location: 92612-92852 bp Feature: domain Description: FtsK Location: 9261 2-92852 bp Feature: gene Location: 93022-94164 bp Feature: domain Description: Dcm Location: 93025-94138 bp Feature: domain Description: Dcm Location: 93025-941 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: ATKJ02000110.1 Enterococcus raffinosus cftri2200 contig_110, whole genome shotgun sequence (6603 bp)
Overview 1 RT 1: 867-5130 bp Neighborhood of RT #1 [867, 5165] Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-GII KOG4768 Relaxase Feature: gene Location: 867-1307 bp Feature: gene Location: 1612-2754 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1657-1786 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1657-1786 bp Feature: domain Description: Phage_int_SAM_3 Location: 1813-1981 bp Feature: domain Description: Phage_int_SAM_3 Location: 1813-1981 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2170-2698 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2 170-2 698 bp Feature: gene Location: 3422-4084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3506-3947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3506-3947 bp Feature: gene Location: 3999-4271 bp Feature: domain Description: KOG4768 Location: 4023-4224 bp Feature: domain Description: KOG4768 Location: 402 3-42 2 4 bp Feature: gene Location: 4803-5165 bp Feature: domain Description: Relaxase Location: 4833-5130 bp Feature: domain Description: Relaxase Location: 4833-5130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Relaxase (pfam03432)