myRT

myRT report for GCA_000440115.1_version1

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Seq: ALMY01000083.1 Streptococcus suis YS56 Contig00085, whole genome shotgun sequence (46551 bp)
Overview 1 RT 1: 1257-10554 bp 2 RT 2: 24697-30117 bp Neighborhood of RT #1 [1257, 10958] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Neighborhood of RT #2 [24697, 30117] TraG-D_C RVT-GII T4SS-DNA_transf Feature: gene Location: 1257-1556 bp Feature: gene Location: 1627-2646 bp Feature: domain Description: KOG1000 Location: 1702-1897 bp Feature: domain Description: KOG1 000 Location: 1 702-1 897 bp Feature: gene Location: 2679-4490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2943-3765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2943-3765 bp Feature: domain Description: Intron_maturas2 Location: 3834-4308 bp Feature: domain Description: Intron_maturas2 Location: 3834-4308 bp Feature: domain Description: HNHc Note: nucleases Location: 4308-4473 bp Feature: domain Description: HNHc Note: nucleases Location: 4308-4473 bp Feature: gene Location: 4730-4930 bp Feature: gene Location: 5055-10958 bp Feature: domain Description: N6_Mtase Location: 7068-7659 bp Feature: domain Description: N6_Mtase Location: 7068-7659 bp Feature: domain Description: COG4646 Location: 8253-10554 bp Feature: domain Description: COG4646 Location: 8253-1 0554 bp Feature: gene Location: 24697-24939 bp Feature: gene Location: 24957-25589 bp Feature: domain Description: TraG-D_C Location: 25050-25377 bp Feature: domain Description: TraG-D_C Location: 25050-25377 bp Feature: gene Location: 25600-27510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25909-26665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25909-26665 bp Feature: gene Location: 28262-29593 bp Feature: domain Description: T4SS-DNA_transf Location: 28649-29537 bp Feature: domain Description: T4SS-DNA_transf Location: 28649-29537 bp Feature: gene Location: 29593-30117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), TraG-D_C (pfam12696), T4SS-DNA_transf (pfam02534)