myRT

myRT report for GCA_000440335.1_version1

Download annotations/find similar RTs

Seq: ALKV01000003.1 Streptococcus suis 14636 Contig00003, whole genome shotgun sequence (178177 bp)
Overview 1 RT 1: 124492-134641 bp Neighborhood of RT #1 [124492, 134641] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 124492-124791 bp Feature: gene Location: 124862-126205 bp Feature: domain Description: KOG1000 Location: 125141-125456 bp Feature: domain Description: KOG1 000 Location: 1 251 41 -1 25456 bp Feature: gene Location: 126343-128121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126604-127396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 26604-1 27396 bp Feature: domain Description: Intron_maturas2 Location: 127501-127732 bp Feature: domain Description: Intron_maturas2 Location: 1 27501 -1 27732 bp Feature: domain Description: HNHc Note: nucleases Location: 127897-128083 bp Feature: domain Description: HNHc Note: nucleases Location: 1 27897-1 28083 bp Feature: gene Location: 128619-134081 bp Feature: domain Description: N6_Mtase Location: 130632-131223 bp Feature: domain Description: N6_Mtase Location: 1 30632-1 31 223 bp Feature: domain Description: COG4646 Location: 131814-133938 bp Feature: domain Description: COG4646 Location: 1 31 81 4-1 33938 bp Feature: gene Location: 134132-134641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )