myRT

myRT report for GCA_000440355.1_version1

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Seq: ALKW01000011.1 Streptococcus suis 14A Contig00011, whole genome shotgun sequence (41620 bp)
Overview 1 RT 1: 10358-20507 bp Neighborhood of RT #1 [10358, 20507] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 10358-10867 bp Feature: gene Location: 10918-16380 bp Feature: domain Description: N6_Mtase Location: 12931-13522 bp Feature: domain Description: N6_Mtase Location: 1 2931 -1 3522 bp Feature: domain Description: COG4646 Location: 14116-16225 bp Feature: domain Description: COG4646 Location: 1 41 1 6-1 6225 bp Feature: gene Location: 16878-18656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17139-17931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 39-1 7931 bp Feature: domain Description: Intron_maturas2 Location: 18036-18267 bp Feature: domain Description: Intron_maturas2 Location: 1 8036-1 8267 bp Feature: domain Description: HNHc Note: nucleases Location: 18432-18618 bp Feature: domain Description: HNHc Note: nucleases Location: 1 8432-1 861 8 bp Feature: gene Location: 18794-20137 bp Feature: domain Description: KOG1000 Location: 19073-19385 bp Feature: domain Description: KOG1 000 Location: 1 9073-1 9385 bp Feature: gene Location: 20208-20507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: ALKW01000078.1 Streptococcus suis 14A Contig00079, whole genome shotgun sequence (2318 bp)
Overview 1 RT 1: 90-1431 bp Neighborhood of RT #1 [90, 1796] RVT_N RVT-GII GIIM Feature: gene Location: 90-1796 bp Feature: RT Description: RVT_N Location: 195-435 bp Feature: RT Description: RVT_N Location: 195-435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-1143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-1143 bp Feature: domain Description: GIIM Note: maturase Location: 1212-1431 bp Feature: domain Description: GIIM Note: maturase Location: 12 12 -1431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)