myRT

myRT report for GCA_000440675.1_version1

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Seq: ALLM01000124.1 Streptococcus suis 89-5259 Contig00126, whole genome shotgun sequence (40194 bp)
Overview 1 RT 1: 6453-16622 bp Neighborhood of RT #1 [6453, 16622] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 6453-7004 bp Feature: gene Location: 7054-12495 bp Feature: domain Description: N6_Mtase Location: 9046-9637 bp Feature: domain Description: N6_Mtase Location: 9046-9637 bp Feature: domain Description: COG4646 Location: 10228-12352 bp Feature: domain Description: COG4646 Location: 1 0228-1 2352 bp Feature: gene Location: 12993-14771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13254-14046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3254-1 4046 bp Feature: domain Description: Intron_maturas2 Location: 14151-14382 bp Feature: domain Description: Intron_maturas2 Location: 1 41 51 -1 4382 bp Feature: domain Description: HNHc Note: nucleases Location: 14565-14733 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4565-1 4733 bp Feature: gene Location: 14909-16252 bp Feature: domain Description: KOG1000 Location: 15188-15503 bp Feature: domain Description: KOG1 000 Location: 1 51 88-1 5503 bp Feature: gene Location: 16323-16622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )