myRT

myRT report for GCA_000441335.1_version1

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Seq: ALMU01000004.1 Streptococcus suis YS4 Contig00004, whole genome shotgun sequence (2787 bp)
Overview 1 RT 1: 728-2480 bp Neighborhood of RT #1 [728, 2641] RVT-GII cas_Csn1 Feature: gene Location: 728-2641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1055-1790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 055-1 790 bp Feature: domain Description: cas_Csn1 Location: 2198-2480 bp Feature: domain Description: cas_Csn1 Location: 21 98-2480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, cas_Csn1 (TIGR01865)

Seq: ALMU01000056.1 Streptococcus suis YS4 Contig00056, whole genome shotgun sequence (176094 bp)
Overview 1 RT 1: 6933-17246 bp Neighborhood of RT #1 [6933, 17246] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 6933-7484 bp Feature: gene Location: 7521-13448 bp Feature: domain Description: N6_Mtase Location: 9558-10149 bp Feature: domain Description: N6_Mtase Location: 9558-10149 bp Feature: domain Description: COG4646 Location: 10740-13044 bp Feature: domain Description: COG4646 Location: 10740-13044 bp Feature: gene Location: 14013-15824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14277-15099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 77-15099 bp Feature: domain Description: Intron_maturas2 Location: 15168-15642 bp Feature: domain Description: Intron_maturas2 Location: 15168-15642 bp Feature: domain Description: HNHc Note: nucleases Location: 15642-15807 bp Feature: domain Description: HNHc Note: nucleases Location: 15642 -15807 bp Feature: gene Location: 15965-16876 bp Feature: gene Location: 16947-17246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )