myRT

myRT report for GCA_000441975.1_CLC6_0_3

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Seq: ATLL01000119.1 Pseudomonas avellanae CRAFRUec1 contig119, whole genome shotgun sequence (1733 bp)
Overview 1 RT 1: 1-1732 bp Neighborhood of RT #1 [1, 1732] RVT-GII GIIM Feature: gene Location: 1-1224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244-859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244-859 bp Feature: domain Description: GIIM Note: maturase Location: 904-1114 bp Feature: domain Description: GIIM Note: maturase Location: 904-1 1 1 4 bp Feature: gene Location: 1448-1732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: ATLL01000147.1 Pseudomonas avellanae CRAFRUec1 contig147, whole genome shotgun sequence (20191 bp)
Overview 1 RT 1: 1-6955 bp Neighborhood of RT #1 [1, 6957] autotrans_barl RVT-GII GIIM FimA Feature: gene Location: 1-2196 bp Feature: domain Description: autotrans_barl Location: 979-2194 bp Feature: domain Description: autotrans_barl Location: 979-2 194 bp Feature: gene Location: 2221-2649 bp Feature: gene Location: 2768-4093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3029-3644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 9-3644 bp Feature: domain Description: GIIM Note: maturase Location: 3701-3926 bp Feature: domain Description: GIIM Note: maturase Location: 3701-392 6 bp Feature: gene Location: 4293-5798 bp Feature: gene Location: 5836-6957 bp Feature: domain Description: FimA Location: 6469-6955 bp Feature: domain Description: FimA Location: 6469-6955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT autotrans_barl (TIGR01414), RVT-GII, GIIM (pfam08388), FimA (pfam16970)

Seq: ATLL01000533.1 Pseudomonas avellanae CRAFRUec1 contig533, whole genome shotgun sequence (1850 bp)
Overview 1 RT 1: 382-1615 bp Neighborhood of RT #1 [382, 1749] RVT-GII GIIM Feature: gene Location: 382-1749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 715-1330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 715-13 3 0 bp Feature: domain Description: GIIM Note: maturase Location: 1387-1615 bp Feature: domain Description: GIIM Note: maturase Location: 13 87-1615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)