myRT

myRT report for GCA_000442045.1_EfmE155_v1.0

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Seq: AUWX01000169.1 Enterococcus faecium E155 contig0169, whole genome shotgun sequence (6154 bp)
Overview 1 RT 1: 396-5408 bp Neighborhood of RT #1 [396, 5500] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Zeta_toxin Feature: gene Location: 396-740 bp Feature: domain Description: RelB_DinJ Location: 606-732 bp Feature: domain Description: RelB_DinJ Location: 606-732 bp Feature: gene Location: 809-1825 bp Feature: domain Description: FtsK_SpoIIIE Location: 1466-1706 bp Feature: domain Description: FtsK_SpoIIIE Location: 1 466-1 706 bp Feature: gene Location: 2419-4293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2785-3481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2785-3481 bp Feature: domain Description: HNHc Note: nucleases Location: 4021-4180 bp Feature: domain Description: HNHc Note: nucleases Location: 4021 -41 80 bp Feature: gene Location: 4395-4748 bp Feature: domain Description: FtsK Location: 4407-4647 bp Feature: domain Description: FtsK Location: 4407-4647 bp Feature: gene Location: 4826-5500 bp Feature: domain Description: Zeta_toxin Location: 4925-5408 bp Feature: domain Description: Zeta_toxin Location: 4925-5408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Zeta_toxin (pfam06414)

Seq: AUWX01000195.1 Enterococcus faecium E155 contig0195, whole genome shotgun sequence (4922 bp)
Overview 1 RT 1: 527-4653 bp Neighborhood of RT #1 [527, 4653] RVT-GII PolY_Pol_V_umuC Feature: gene Location: 527-784 bp Feature: gene Location: 1074-2936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1383-2121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1383-2 12 1 bp Feature: gene Location: 3057-4313 bp Feature: domain Description: PolY_Pol_V_umuC Location: 3063-4092 bp Feature: domain Description: PolY_Pol_V_umuC Location: 3063-4092 bp Feature: gene Location: 4306-4653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PolY_Pol_V_umuC (cd01700)

Seq: AUWX01000251.1 Enterococcus faecium E155 contig0251, whole genome shotgun sequence (3289 bp)
Overview 1 RT 1: 2-2625 bp Neighborhood of RT #1 [2, 3287] HsdM RVT-AbiP2 Feature: gene Location: 2-1480 bp Feature: domain Description: HsdM Location: 23-1448 bp Feature: domain Description: HsdM Location: 23 -1448 bp Feature: gene Location: 1818-3287 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2160-2625 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2160-2625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: AUWX01000264.1 Enterococcus faecium E155 contig0264, whole genome shotgun sequence (2781 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054 -1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 234 7-2512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)