myRT

myRT report for GCA_000442275.2_Thalar

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Seq: KE557310.1 Thalassobacter arenae DSM 19593 genomic scaffold Contig33, whole genome shotgun sequence (371932 bp)
Overview 1 RT 1: 1135-10113 bp Neighborhood of RT #1 [1135, 10115] RMtype1_S_EcoEI-TRD1-CR1_like PRK09737 RMtype1_S_EcoEI-TRD1-CR1_like HsdR EcoEI_R_C RVT-Retrons RNR_II_dimer DUF1489 Feature: gene Location: 1135-2376 bp Ori: EPX81458.1 Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 1249-1726 bp Feature: domain Description: RMtype1 _S_EcoEI-TRD1 -CR1 _like Location: 1 249-1 726 bp Feature: domain Description: PRK09737 Location: 1762-1972 bp Feature: domain Description: PRK09737 Location: 1 762-1 972 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 2074-2344 bp Feature: domain Description: RMtype1 _S_EcoEI-TRD1 -CR1 _like Location: 2074-2344 bp Feature: gene Location: 2721-5027 bp Ori: EPX81459.1 Feature: domain Description: HsdR Location: 2730-4335 bp Feature: domain Description: HsdR Location: 2730-4335 bp Feature: domain Description: EcoEI_R_C Location: 4554-5019 bp Feature: domain Description: EcoEI_R_C Location: 4554-501 9 bp Feature: gene Location: 5117-6880 bp Ori: EPX81460.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5252-5894 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5252-5894 bp Feature: gene Location: 7356-9629 bp Ori: EPX81461.1 Feature: domain Description: RNR_II_dimer Location: 7518-9018 bp Feature: domain Description: RNR_II_dimer Location: 751 8-901 8 bp Feature: gene Location: 9693-10115 bp Ori: EPX81462.1 Feature: domain Description: DUF1489 Location: 9705-10113 bp Feature: domain Description: DUF1 489 Location: 9705-1 01 1 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_EcoEI-TRD1-CR1_like (cd17260), PRK09737 (type I restriction-modification system specificity subunit), HsdR (COG4096), EcoEI_R_C (pfam08463), RVT-Retrons, RNR_II_dimer (cd02888), DUF1489 (pfam07370)