myRT

myRT report for GCA_000443105.1_MhD38v2

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Seq: AUNL01000004.1 Mannheimia haemolytica D38 Cont12, whole genome shotgun sequence (57115 bp)
Overview 1 RT 1: 9242-18231 bp Neighborhood of RT #1 [9242, 18231] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 9242-10306 bp Ori: EPZ03294.1 Feature: domain Description: ECA_wecA Location: 9254-10271 bp Feature: domain Description: ECA_wecA Location: 9254-1 0271 bp Feature: gene Location: 10448-11728 bp Ori: EPZ03295.1 Feature: domain Description: PRK00062 Location: 10454-11723 bp Feature: domain Description: PRK00062 Location: 1 0454-1 1 723 bp Feature: gene Location: 11980-13290 bp Ori: EPZ03296.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12175-12994 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 21 75-1 2994 bp Feature: gene Location: 13685-17968 bp Ori: EPZ03297.1 Feature: domain Description: PRK00566 Location: 13721-17810 bp Feature: domain Description: PRK00566 Location: 1 3721 -1 781 0 bp Feature: gene Location: 18040-18231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)

Seq: AUNL01000014.1 Mannheimia haemolytica D38 Cont21, whole genome shotgun sequence (45961 bp)
Overview 1 RT 1: 42361-44232 bp Neighborhood of RT #1 [42361, 44237] GIIM HNHc RVT-GII RVT_N RVT-GII Feature: gene Location: 42361-42495 bp Feature: gene Location: 42517-43131 bp Ori: EPZ02752.1 Feature: domain Description: GIIM Note: maturase Location: 42529-42712 bp Feature: domain Description: GIIM Note: maturase Location: 42 52 9-42 712 bp Feature: domain Description: HNHc Note: nucleases Location: 42940-43096 bp Feature: domain Description: HNHc Note: nucleases Location: 42 940-43096 bp Feature: gene Location: 43128-43592 bp Ori: EPZ02753.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43134-43500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43134-43500 bp Feature: gene Location: 43707-44237 bp Ori: EPZ02754.1 Feature: domain Description: RVT_N Location: 43776-44019 bp Feature: domain Description: RVT_N Location: 43776-44019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44064-44232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44064-442 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655)