myRT

myRT report for GCA_000443185.1_MhSwine2000v2

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Seq: ATTA01000034.1 Mannheimia haemolytica MhSwine2000 Cont4, whole genome shotgun sequence (173042 bp)
Overview 1 RT 1: 10634-23636 bp Neighborhood of RT #1 [10634, 23647] ECA_wecA PRK00062 RVT-UG2 PRK00566 rpoB Feature: gene Location: 10634-11698 bp Ori: EPZ25911.1 Feature: domain Description: ECA_wecA Location: 10646-11663 bp Feature: domain Description: ECA_wecA Location: 1 0646-1 1 663 bp Feature: gene Location: 11840-13120 bp Ori: EPZ25912.1 Feature: domain Description: PRK00062 Location: 11846-13115 bp Feature: domain Description: PRK00062 Location: 1 1 846-1 31 1 5 bp Feature: gene Location: 13372-14682 bp Ori: EPZ25913.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13567-14386 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 3567-1 4386 bp Feature: gene Location: 15077-19360 bp Ori: EPZ25914.1 Feature: domain Description: PRK00566 Location: 15113-19202 bp Feature: domain Description: PRK00566 Location: 1 51 1 3-1 9202 bp Feature: gene Location: 19622-23647 bp Ori: EPZ25915.1 Gene: rpoB Feature: domain Description: rpoB Location: 19646-23636 bp Feature: domain Description: rpoB Location: 1 9646-23636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), rpoB (TIGR02013)

Seq: ATTA01000056.1 Mannheimia haemolytica MhSwine2000 Cont6, whole genome shotgun sequence (136327 bp)
Overview 1 RT 1: 79335-83731 bp Neighborhood of RT #1 [79335, 83733] GIIM HNHc RVT-GII RVT_N RVT-GII rpsI rplM Feature: gene Location: 79335-79469 bp Feature: gene Location: 79491-80105 bp Ori: EPZ24234.1 Feature: domain Description: GIIM Note: maturase Location: 79503-79686 bp Feature: domain Description: GIIM Note: maturase Location: 79503-79686 bp Feature: domain Description: HNHc Note: nucleases Location: 79914-80070 bp Feature: domain Description: HNHc Note: nucleases Location: 79914-80070 bp Feature: gene Location: 80102-80566 bp Ori: EPZ24235.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80108-80474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80108-80474 bp Feature: gene Location: 80681-81211 bp Ori: EPZ24236.1 Feature: domain Description: RVT_N Location: 80750-80993 bp Feature: domain Description: RVT_N Location: 80750-80993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81038-81206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81038-812 06 bp Feature: gene Location: 82893-83288 bp Ori: EPZ24156.1 Feature: domain Description: rpsI Location: 82905-83286 bp Feature: domain Description: rpsI Location: 82 905-832 86 bp Feature: gene Location: 83305-83733 bp Ori: EPZ24157.1 Feature: domain Description: rplM Location: 83308-83731 bp Feature: domain Description: rplM Location: 83308-83731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655), rpsI (PRK00132), rplM (PRK09216)