myRT

myRT report for GCA_000443225.1_MhBrainv2

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Seq: ATSZ01000023.1 Mannheimia haemolytica MhBrain2012 Cont3, whole genome shotgun sequence (232401 bp)
Overview 1 RT 1: 79574-83970 bp Neighborhood of RT #1 [79574, 83972] GIIM HNHc RVT-GII RVT_N RVT-GII rpsI rplM Feature: gene Location: 79574-79708 bp Feature: gene Location: 79730-80344 bp Ori: EPZ26467.1 Feature: domain Description: GIIM Note: maturase Location: 79742-79925 bp Feature: domain Description: GIIM Note: maturase Location: 79742-79925 bp Feature: domain Description: HNHc Note: nucleases Location: 80153-80309 bp Feature: domain Description: HNHc Note: nucleases Location: 801 53-80309 bp Feature: gene Location: 80341-80805 bp Ori: EPZ26468.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80347-80713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80347-8071 3 bp Feature: gene Location: 80920-81450 bp Ori: EPZ26469.1 Feature: domain Description: RVT_N Location: 80989-81232 bp Feature: domain Description: RVT_N Location: 80989-81 232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81277-81445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 277-81 445 bp Feature: gene Location: 83132-83527 bp Ori: EPZ26355.1 Feature: domain Description: rpsI Location: 83144-83525 bp Feature: domain Description: rpsI Location: 831 44-83525 bp Feature: gene Location: 83544-83972 bp Ori: EPZ26356.1 Feature: domain Description: rplM Location: 83547-83970 bp Feature: domain Description: rplM Location: 83547-83970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655), rpsI (PRK00132), rplM (PRK09216)

Seq: ATSZ01000004.1 Mannheimia haemolytica MhBrain2012 Cont12, whole genome shotgun sequence (75724 bp)
Overview 1 RT 1: 56035-64989 bp Neighborhood of RT #1 [56035, 65024] PRK00566 RVT-UG2 PRK00062 ECA_wecA Feature: gene Location: 56035-56226 bp Feature: gene Location: 56298-60581 bp Ori: EPZ28421.1 Feature: domain Description: PRK00566 Location: 56334-60423 bp Feature: domain Description: PRK00566 Location: 56334-6042 3 bp Feature: gene Location: 60976-62286 bp Ori: EPZ28422.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 61171-61990 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 61171-61990 bp Feature: gene Location: 62538-63818 bp Ori: EPZ28423.1 Feature: domain Description: PRK00062 Location: 62544-63813 bp Feature: domain Description: PRK00062 Location: 62 544-63813 bp Feature: gene Location: 63960-65024 bp Ori: EPZ28424.1 Feature: domain Description: ECA_wecA Location: 63972-64989 bp Feature: domain Description: ECA_wecA Location: 63972 -64989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), ECA_wecA (TIGR02380)