myRT

myRT report for GCA_000445445.1_SOV1

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Seq: ASXP01000001.1 Sporomusa ovata DSM 2662 SOV_1c, whole genome shotgun sequence (1375116 bp)
Overview 1 RT 1: 326093-331897 bp 2 RT 2: 1108800-1113634 bp 3 RT 3: 1270543-1278323 bp Neighborhood of RT #1 [326093, 331911] PRK00865 RVT-GII Intron_maturas2 LysR QueG Neighborhood of RT #2 [1108800, 1113648] RVT-GII Intron_maturas2 PG_binding_1 Spr Neighborhood of RT #3 [1270543, 1278331] KOG0430 CoxL MoeA_like RVT-GII AcoR RocR Feature: gene Location: 326093-326197 bp Feature: gene Location: 326364-327140 bp Ori: EQB28619.1 Gene: yrpC Feature: domain Description: PRK00865 Location: 326370-327075 bp Feature: domain Description: PRK00865 Location: 326370-327075 bp Feature: gene Location: 327930-329705 bp Ori: EQB28620.1 Gene: ltrA1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328203-328998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328203-328998 bp Feature: domain Description: Intron_maturas2 Location: 329082-329367 bp Feature: domain Description: Intron_maturas2 Location: 329082-329367 bp Feature: gene Location: 329916-330782 bp Ori: EQB28621.1 Feature: domain Description: LysR Location: 329919-330774 bp Feature: domain Description: LysR Location: 32991 9-330774 bp Feature: gene Location: 331390-331911 bp Ori: EQB28622.1 Feature: domain Description: QueG Location: 331510-331897 bp Feature: domain Description: QueG Location: 331 51 0-331 897 bp Feature: gene Location: 1108800-1108940 bp Feature: gene Location: 1108996-1109613 bp Feature: gene Location: 1109891-1111663 bp Ori: EQB29350.1 Gene: ltrA2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1110164-1110956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 01 64-1 1 1 0956 bp Feature: domain Description: Intron_maturas2 Location: 1111040-1111325 bp Feature: domain Description: Intron_maturas2 Location: 1 1 1 1 040-1 1 1 1 325 bp Feature: gene Location: 1112170-1112397 bp Feature: gene Location: 1112941-1113648 bp Ori: EQB29352.1 Gene: lytF Feature: domain Description: PG_binding_1 Location: 1113067-1113229 bp Feature: domain Description: PG_binding_1 Location: 1 1 1 3067-1 1 1 3229 bp Feature: domain Description: Spr Location: 1113292-1113634 bp Feature: domain Description: Spr Location: 1 1 1 3292-1 1 1 3634 bp Feature: gene Location: 1270543-1273272 bp Ori: EQB29526.1 Gene: mop1 Feature: domain Description: KOG0430 Location: 1270564-1271020 bp Feature: domain Description: KOG0430 Location: 1 270564-1 271 020 bp Feature: domain Description: CoxL Location: 1271080-1273264 bp Feature: domain Description: CoxL Location: 1 271 080-1 273264 bp Feature: gene Location: 1273377-1274402 bp Ori: EQB29527.1 Feature: domain Description: MoeA_like Location: 1273410-1274346 bp Feature: domain Description: MoeA_like Location: 1 27341 0-1 274346 bp Feature: gene Location: 1274604-1275161 bp Ori: EQB29528.1 Gene: ltrA3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274850-1275096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 274850-1 275096 bp Feature: gene Location: 1276284-1276946 bp Ori: EQB29529.1 Gene: stc3 Feature: domain Description: AcoR Location: 1276365-1276935 bp Feature: domain Description: AcoR Location: 1 276365-1 276935 bp Feature: gene Location: 1276985-1278331 bp Ori: EQB29530.1 Gene: stc4 Feature: domain Description: RocR Location: 1276991-1278323 bp Feature: domain Description: RocR Location: 1 276991 -1 278323 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: ASXP01000005.1 Sporomusa ovata DSM 2662 SOV_5c, whole genome shotgun sequence (564007 bp)
Overview 1 RT 1: 395207-402350 bp Neighborhood of RT #1 [395207, 402364] PRK00451 PRK01202 RVT-GII Intron_maturas2 gcvT MttB2 Feature: gene Location: 395207-396553 bp Ori: EQB25178.1 Gene: gcvPA2 Feature: domain Description: PRK00451 Location: 395219-396548 bp Feature: domain Description: PRK00451 Location: 3952 19-396548 bp Feature: gene Location: 396555-396944 bp Ori: EQB25179.1 Gene: gcvH3 Feature: domain Description: PRK01202 Location: 396558-396930 bp Feature: domain Description: PRK012 02 Location: 396558-396930 bp Feature: gene Location: 397450-399222 bp Ori: EQB25180.1 Gene: ltrA7 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397723-398515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39772 3-398515 bp Feature: domain Description: Intron_maturas2 Location: 398599-398884 bp Feature: domain Description: Intron_maturas2 Location: 398599-398884 bp Feature: gene Location: 399380-400471 bp Ori: EQB25181.1 Gene: gcvT2 Feature: domain Description: gcvT Location: 399389-400469 bp Feature: domain Description: gcvT Location: 399389-400469 bp Feature: gene Location: 400898-402364 bp Ori: EQB25182.1 Gene: mttB6 Feature: domain Description: MttB2 Location: 400934-402350 bp Feature: domain Description: MttB2 Location: 400934-402 350 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: ASXP01000003.1 Sporomusa ovata DSM 2662 SOV_3c, whole genome shotgun sequence (1040355 bp)
Overview 1 RT 1: 294256-304810 bp 2 RT 2: 945486-953978 bp Neighborhood of RT #1 [294256, 304810] ParE_toxin RVT-GII GIIM rmlC PRK10084 GalU YdcF-like RVT-GII GIIM PHA02517 HNHc RVT-GII GIIM PRK06526 Neighborhood of RT #2 [945486, 954022] GntR PDC1_MCP_like Tar RVT-GII Intron_maturas2 PRK12814 FeFe_hydrog_A Fe_hyd_SSU NuoF Feature: gene Location: 294256-294579 bp Ori: EQB26420.1 Feature: domain Description: ParE_toxin Location: 294268-294541 bp Feature: domain Description: ParE_toxin Location: 294268-294541 bp Feature: gene Location: 294593-294781 bp Feature: gene Location: 294897-296225 bp Ori: EQB26422.1 Gene: ltrA5 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295152-295845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295152-295845 bp Feature: domain Description: GIIM Note: maturase Location: 295929-296133 bp Feature: domain Description: GIIM Note: maturase Location: 295929-29613 3 bp Feature: gene Location: 296738-297295 bp Ori: EQB26423.1 Gene: rfbC Feature: domain Description: rmlC Location: 296744-297260 bp Feature: domain Description: rmlC Location: 296744-297260 bp Feature: gene Location: 297456-298535 bp Ori: EQB26424.1 Gene: rfbB Feature: domain Description: PRK10084 Location: 297468-298491 bp Feature: domain Description: PRK10084 Location: 297468-298491 bp Feature: gene Location: 298727-299686 bp Ori: EQB26425.1 Gene: gtaB2 Feature: domain Description: GalU Location: 298751-299594 bp Feature: domain Description: GalU Location: 298751-299594 bp Feature: gene Location: 300108-300860 bp Ori: EQB26426.1 Feature: domain Description: YdcF-like Location: 300339-300837 bp Feature: domain Description: YdcF-like Location: 3 003 3 9-3 0083 7 bp Feature: gene Location: 300959-301513 bp Ori: EQB26427.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300962-301172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 00962-3 01172 bp Feature: domain Description: GIIM Note: maturase Location: 301256-301460 bp Feature: domain Description: GIIM Note: maturase Location: 3 01256-3 01460 bp Feature: gene Location: 301950-302114 bp Feature: gene Location: 302111-302329 bp Ori: EQB26429.1 Feature: domain Description: PHA02517 Location: 302114-302312 bp Feature: domain Description: PHA02517 Location: 3 02114-3 023 12 bp Feature: gene Location: 302609-303247 bp Ori: EQB26430.1 Feature: domain Description: HNHc Note: nucleases Location: 302855-303011 bp Feature: domain Description: HNHc Note: nucleases Location: 3 02855-3 03 011 bp Feature: gene Location: 303270-303683 bp Ori: EQB26431.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303285-303351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 03 285-3 03 3 51 bp Feature: domain Description: GIIM Note: maturase Location: 303438-303630 bp Feature: domain Description: GIIM Note: maturase Location: 3 03 43 8-3 03 63 0 bp Feature: gene Location: 303741-304508 bp Ori: EQB26432.1 Gene: istB2 Feature: domain Description: PRK06526 Location: 303795-304485 bp Feature: domain Description: PRK06526 Location: 3 03 795-3 04485 bp Feature: gene Location: 304505-304810 bp Feature: gene Location: 945486-946256 bp Ori: EQB27028.1 Feature: domain Description: GntR Location: 945501-946143 bp Feature: domain Description: GntR Location: 945501-946143 bp Feature: gene Location: 946551-948599 bp Ori: EQB27029.1 Gene: tlpB1 Feature: domain Description: PDC1_MCP_like Location: 946740-947133 bp Feature: domain Description: PDC1_MCP_like Location: 946740-94713 3 bp Feature: domain Description: Tar Location: 947283-948597 bp Feature: domain Description: Tar Location: 947283 -948597 bp Feature: gene Location: 949105-950877 bp Ori: EQB27030.1 Gene: ltrA6 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949378-950170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9493 78-950170 bp Feature: domain Description: Intron_maturas2 Location: 950254-950539 bp Feature: domain Description: Intron_maturas2 Location: 950254-95053 9 bp Feature: gene Location: 950973-952721 bp Ori: EQB27031.1 Gene: hndD3 Feature: domain Description: PRK12814 Location: 951009-951303 bp Feature: domain Description: PRK12814 Location: 951009-9513 03 bp Feature: domain Description: FeFe_hydrog_A Location: 951423-952533 bp Feature: domain Description: FeFe_hydrog_A Location: 951423 -95253 3 bp Feature: domain Description: Fe_hyd_SSU Location: 952563-952713 bp Feature: domain Description: Fe_hyd_SSU Location: 952563 -952713 bp Feature: gene Location: 952721-954022 bp Ori: EQB27032.1 Gene: hndC4 Feature: domain Description: NuoF Location: 952730-953978 bp Feature: domain Description: NuoF Location: 95273 0-953 978 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: ASXP01000002.1 Sporomusa ovata DSM 2662 SOV_2c, whole genome shotgun sequence (1234227 bp)
Overview 1 RT 1: 89276-93328 bp 2 RT 2: 406701-412331 bp Neighborhood of RT #1 [89276, 93342] KOG3373 RVT-GII Intron_maturas2 PRK05431 Neighborhood of RT #2 [406701, 412402] RVT-GII Intron_maturas2 HDGYP HDGYP Feature: gene Location: 89276-89398 bp Feature: gene Location: 89400-89546 bp Ori: EQB27196.1 Gene: gcvH2 Feature: domain Description: KOG3373 Location: 89430-89535 bp Feature: domain Description: KOG3373 Location: 894 30-89535 bp Feature: gene Location: 90052-91824 bp Ori: EQB27197.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90325-91117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90325-91117 bp Feature: domain Description: Intron_maturas2 Location: 91201-91486 bp Feature: domain Description: Intron_maturas2 Location: 91201-914 86 bp Feature: gene Location: 91892-92038 bp Feature: gene Location: 92074-93342 bp Ori: EQB27199.1 Gene: serS Feature: domain Description: PRK05431 Location: 92077-93328 bp Feature: domain Description: PRK054 31 Location: 92077-93328 bp Feature: gene Location: 406701-406847 bp Feature: gene Location: 407020-407514 bp Feature: gene Location: 408021-409793 bp Ori: EQB27534.1 Gene: ltrA4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408294-409086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 08294 -4 09086 bp Feature: domain Description: Intron_maturas2 Location: 409170-409455 bp Feature: domain Description: Intron_maturas2 Location: 4 09170-4 094 55 bp Feature: gene Location: 410132-410749 bp Feature: gene Location: 411152-412402 bp Ori: EQB27536.1 Gene: rpfG4 Feature: domain Description: HDGYP Location: 411191-411695 bp Feature: domain Description: HDGYP Location: 4 11191-4 11695 bp Feature: domain Description: HDGYP Location: 411788-412331 bp Feature: domain Description: HDGYP Location: 4 11788-4 12331 bp Sorry, your browser does not support inline SVG.
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