myRT

myRT report for GCA_000452865.1_UB246_042011_1.0

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Seq: KE695172.1 Pseudomonas syringae UB246 genomic scaffold Scaffold_20, whole genome shotgun sequence (166438 bp)
Overview 1 RT 1: 93924-98406 bp Neighborhood of RT #1 [93924, 98406] DUF3158 ICE_PFL4669 RVT-Retrons ABC_ATPase ABC_ATPase Feature: gene Location: 93924-94463 bp Feature: domain Description: DUF3158 Location: 93969-94431 bp Feature: domain Description: DUF31 58 Location: 93969-94431 bp Feature: gene Location: 94467-95195 bp Feature: domain Description: ICE_PFL4669 Location: 94497-95130 bp Feature: domain Description: ICE_PFL4669 Location: 94497-951 30 bp Feature: gene Location: 95694-96641 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95808-96354 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95808-96354 bp Feature: gene Location: 96686-97987 bp Feature: domain Description: ABC_ATPase Location: 96695-96827 bp Feature: domain Description: ABC_ATPase Location: 96695-96827 bp Feature: domain Description: ABC_ATPase Location: 97190-97394 bp Feature: domain Description: ABC_ATPase Location: 971 90-97394 bp Feature: gene Location: 98263-98406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3158 (pfam11358), ICE_PFL4669 (TIGR03761), RVT-Retrons, ABC_ATPase (pfam09818)

Seq: AVEQ01000438.1 Pseudomonas syringae UB246 contig264.1, whole genome shotgun sequence (5076 bp)
Overview 1 RT 1: 485-5074 bp Neighborhood of RT #1 [485, 5074] AAA_21 AAA_21 RVT-Retrons Feature: gene Location: 485-1189 bp Feature: gene Location: 1628-2974 bp Feature: domain Description: AAA_21 Location: 1709-1841 bp Feature: domain Description: AAA_2 1 Location: 1709-1841 bp Feature: domain Description: AAA_21 Location: 2090-2372 bp Feature: domain Description: AAA_2 1 Location: 2 090-2 372 bp Feature: gene Location: 2974-3930 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3076-3643 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3076-3643 bp Feature: gene Location: 4551-4769 bp Feature: gene Location: 4856-5074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons

Seq: KE695189.1 Pseudomonas syringae UB246 genomic scaffold Scaffold_286, whole genome shotgun sequence (88023 bp)
Overview 1 RT 1: 32565-40220 bp Neighborhood of RT #1 [32565, 40228] DDE_Tnp_IS66_C RVT-Retrons Trypsin_2 GSP_synth Feature: gene Location: 32565-32756 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 32616-32730 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3 2616-3 273 0 bp Feature: gene Location: 32982-33716 bp Feature: gene Location: 33758-35575 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33908-34511 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 3 908-3 4511 bp Feature: domain Description: Trypsin_2 Location: 34907-35333 bp Feature: domain Description: Trypsin_2 Location: 3 4907-3 53 3 3 bp Feature: gene Location: 36167-38005 bp Feature: gene Location: 39071-40228 bp Feature: domain Description: GSP_synth Location: 39107-40220 bp Feature: domain Description: GSP_synth Location: 3 9107-40220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-Retrons, Trypsin_2 (pfam13365), GSP_synth (pfam03738)