myRT

myRT report for GCA_000455525.1_M.parvicella.RN1

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Seq: HG422565.1 Candidatus Microthrix parvicella RN1 genomic scaffold, 2605, whole genome shotgun sequence (4211496 bp)
Overview 1 RT 1: 4048491-4052831 bp Neighborhood of RT #1 [4048491, 4052851] InsE PHA02517 RVT-GII GIIM PHA02517 xerC xerC Feature: gene Location: 4048491-4048832 bp Feature: domain Description: InsE Location: 4048518-4048818 bp Feature: domain Description: InsE Location: 404851 8-404881 8 bp Feature: gene Location: 4048829-4049323 bp Feature: domain Description: PHA02517 Location: 4048895-4049231 bp Feature: domain Description: PHA0251 7 Location: 4048895-4049231 bp Feature: gene Location: 4049839-4051287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4050154-4050841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40501 54-4050841 bp Feature: domain Description: GIIM Note: maturase Location: 4050919-4051123 bp Feature: domain Description: GIIM Note: maturase Location: 405091 9-4051 1 23 bp Feature: gene Location: 4051245-4051718 bp Feature: domain Description: PHA02517 Location: 4051392-4051665 bp Feature: domain Description: PHA0251 7 Location: 4051 392-4051 665 bp Feature: gene Location: 4051763-4052851 bp Feature: domain Description: xerC Location: 4051844-4052153 bp Feature: domain Description: xerC Location: 4051 844-40521 53 bp Feature: domain Description: xerC Location: 4052276-4052831 bp Feature: domain Description: xerC Location: 4052276-4052831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), xerC (PRK01287)