myRT

myRT report for GCA_000455845.1_121004

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Seq: AVNJ01000060.1 Legionella pneumophila str. 121004 121004_c9, whole genome shotgun sequence (81040 bp)
Overview 1 RT 1: 21336-27639 bp Neighborhood of RT #1 [21336, 27656] DUF5338 RVT-UG5 Arm-DNA-bind_3 INT_P4_C Gp49 Feature: gene Location: 21336-21527 bp Feature: gene Location: 21855-22220 bp Ori: ERB39919.1 Feature: domain Description: DUF5338 Location: 21864-22071 bp Feature: domain Description: DUF5338 Location: 21 864-22071 bp Feature: gene Location: 22525-25614 bp Ori: ERB39920.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23035-23563 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23035-23563 bp Feature: gene Location: 26029-27249 bp Ori: ERB39863.1 Feature: domain Description: Arm-DNA-bind_3 Location: 26038-26290 bp Feature: domain Description: Arm-DNA-bind_3 Location: 26038-26290 bp Feature: domain Description: INT_P4_C Location: 26644-27175 bp Feature: domain Description: INT_P4_C Location: 26644-271 75 bp Feature: gene Location: 27333-27656 bp Ori: ERB39864.1 Feature: domain Description: Gp49 Location: 27381-27639 bp Feature: domain Description: Gp49 Location: 27381 -27639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), Gp49 (pfam05973)

Seq: AVNJ01000018.1 Legionella pneumophila str. 121004 121004_c25, whole genome shotgun sequence (50420 bp)
Overview 1 RT 1: 1-4858 bp Neighborhood of RT #1 [1, 4858] Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 1-267 bp Ori: ERB41252.1 Feature: domain Description: Dimer_Tnp_Tn5 Location: 16-259 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 16-2 59 bp Feature: gene Location: 338-1858 bp Ori: ERB41253.1 Feature: domain Description: RVT_N Location: 395-638 bp Feature: domain Description: RVT_N Location: 395-638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 683-1307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 683-1307 bp Feature: domain Description: GIIM Note: maturase Location: 1358-1592 bp Feature: domain Description: GIIM Note: maturase Location: 1358-1592 bp Feature: gene Location: 2706-3080 bp Ori: ERB41254.1 Feature: domain Description: Tra_M Location: 2754-2949 bp Feature: domain Description: Tra_M Location: 2 754-2 949 bp Feature: gene Location: 3278-4858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261)