myRT

myRT report for GCA_000456205.1_Esch_coli_HVH_16_4-7649002_V1

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Seq: KE698920.1 Escherichia coli HVH 16 (4-7649002) genomic scaffold acXtT-supercont1.11, whole genome shotgun sequence (119569 bp)
Overview 1 RT 1: 62024-66635 bp 2 RT 2: 77947-83683 bp Neighborhood of RT #1 [62024, 66655] PRK10173 PRK10173 RVT-GII rve PRK08181 Neighborhood of RT #2 [77947, 83721] PRK08181 rve RVT-GII GIIM PHA02517 InsE Feature: gene Location: 62024-62473 bp Feature: domain Description: PRK10173 Location: 62027-62465 bp Feature: domain Description: PRK1 01 73 Location: 62027-62465 bp Feature: gene Location: 62448-62768 bp Feature: domain Description: PRK10173 Location: 62451-62679 bp Feature: domain Description: PRK1 01 73 Location: 62451 -62679 bp Feature: gene Location: 62807-63310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63080-63152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63080-631 52 bp Feature: gene Location: 64404-65903 bp Feature: domain Description: rve Location: 64776-65169 bp Feature: domain Description: rve Location: 64776-651 69 bp Feature: gene Location: 65900-66655 bp Feature: domain Description: PRK08181 Location: 65924-66635 bp Feature: domain Description: PRK081 81 Location: 65924-66635 bp Feature: gene Location: 77947-78702 bp Feature: domain Description: PRK08181 Location: 77971-78682 bp Feature: domain Description: PRK081 81 Location: 77971 -78682 bp Feature: gene Location: 78699-80198 bp Feature: domain Description: rve Location: 79071-79464 bp Feature: domain Description: rve Location: 79071 -79464 bp Feature: gene Location: 81292-82815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81565-82297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 565-82297 bp Feature: domain Description: GIIM Note: maturase Location: 82372-82570 bp Feature: domain Description: GIIM Note: maturase Location: 82372-82570 bp Feature: gene Location: 82932-83288 bp Feature: domain Description: PHA02517 Location: 82935-83244 bp Feature: domain Description: PHA0251 7 Location: 82935-83244 bp Feature: gene Location: 83317-83721 bp Feature: domain Description: InsE Location: 83347-83683 bp Feature: domain Description: InsE Location: 83347-83683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, rve (pfam00665), PRK08181 (transposase; Validated), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)