myRT

myRT report for GCA_000456425.1_Esch_coli_HVH_28_4-0907367_V1

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Seq: KE699103.1 Escherichia coli HVH 28 (4-0907367) genomic scaffold acXtI-supercont1.7, whole genome shotgun sequence (126682 bp)
Overview 1 RT 1: 112334-116158 bp Neighborhood of RT #1 [112334, 116160] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 112334-112738 bp Ori: EQO00361.1 Feature: domain Description: InsE Location: 112364-112700 bp Feature: domain Description: InsE Location: 1 1 2364-1 1 2700 bp Feature: gene Location: 112767-113123 bp Ori: EQO00362.1 Feature: domain Description: PHA02517 Location: 112770-113079 bp Feature: domain Description: PHA0251 7 Location: 1 1 2770-1 1 3079 bp Feature: gene Location: 113240-114763 bp Ori: EQO00363.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113513-114245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 351 3-1 1 4245 bp Feature: domain Description: GIIM Note: maturase Location: 114320-114518 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 4320-1 1 451 8 bp Feature: gene Location: 115355-115834 bp Ori: EQO00364.1 Feature: domain Description: PHA02517 Location: 115415-115769 bp Feature: domain Description: PHA0251 7 Location: 1 1 541 5-1 1 5769 bp Feature: gene Location: 115834-116160 bp Ori: EQO00365.1 Feature: domain Description: InsE Location: 115837-116158 bp Feature: domain Description: InsE Location: 1 1 5837-1 1 61 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: KE699098.1 Escherichia coli HVH 28 (4-0907367) genomic scaffold acXtI-supercont1.2, whole genome shotgun sequence (453913 bp)
Overview 1 RT 1: 104135-108659 bp Neighborhood of RT #1 [104135, 108808] HTH_33 DDE_3 RVT-AbiP2 PRK09183 COG4584 Feature: gene Location: 104135-104521 bp Feature: gene Location: 104597-105496 bp Ori: EQO08527.1 Feature: domain Description: HTH_33 Location: 104759-104921 bp Feature: domain Description: HTH_33 Location: 104759-10492 1 bp Feature: domain Description: DDE_3 Location: 104963-105392 bp Feature: domain Description: DDE_3 Location: 104963-105392 bp Feature: gene Location: 105598-106968 bp Ori: EQO08528.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 105859-106315 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 105859-106315 bp Feature: gene Location: 107007-107786 bp Ori: EQO08529.1 Feature: domain Description: PRK09183 Location: 107013-107784 bp Feature: domain Description: PRK09183 Location: 107013-107784 bp Feature: gene Location: 107786-108808 bp Ori: EQO08530.1 Feature: domain Description: COG4584 Location: 107789-108659 bp Feature: domain Description: COG4584 Location: 107789-108659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )