myRT

myRT report for GCA_000456645.1_Esch_coli_HVH_41_4-2677849_V1

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Seq: KE699219.1 Escherichia coli HVH 41 (4-2677849) genomic scaffold acYwL-supercont1.1, whole genome shotgun sequence (855816 bp)
Overview 1 RT 1: 294766-300797 bp Neighborhood of RT #1 [294766, 300934] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 294766-294906 bp Ori: EQO73757.1 Feature: domain Description: SfsB Location: 294775-294847 bp Feature: domain Description: SfsB Location: 294775-294847 bp Feature: gene Location: 294903-295373 bp Feature: gene Location: 295720-298929 bp Ori: EQO73759.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 296248-296737 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 296248-296737 bp Feature: domain Description: nitrilase Location: 298243-298840 bp Feature: domain Description: nitrilase Location: 298243-298840 bp Feature: gene Location: 299245-300027 bp Ori: EQO73760.1 Feature: domain Description: AbiEi_3_N Location: 299257-299518 bp Feature: domain Description: AbiEi_3_N Location: 299257-29951 8 bp Feature: domain Description: AbiEi_3 Location: 299530-299986 bp Feature: domain Description: AbiEi_3 Location: 299530-299986 bp Feature: gene Location: 300014-300934 bp Ori: EQO73761.1 Feature: domain Description: AbiEii Location: 300056-300797 bp Feature: domain Description: AbiEii Location: 300056-300797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: KE699223.1 Escherichia coli HVH 41 (4-2677849) genomic scaffold acYwL-supercont1.13, whole genome shotgun sequence (2856 bp)
Overview 1 RT 1: 105-2856 bp Neighborhood of RT #1 [105, 2856] RVT-GII GIIM PHA02517 Feature: gene Location: 105-1628 bp Ori: EQO51795.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-1110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-1110 bp Feature: domain Description: GIIM Note: maturase Location: 1185-1383 bp Feature: domain Description: GIIM Note: maturase Location: 1185-1383 bp Feature: gene Location: 2220-2699 bp Ori: EQO51796.1 Feature: domain Description: PHA02517 Location: 2280-2634 bp Feature: domain Description: PHA02 517 Location: 2 2 80-2 634 bp Feature: gene Location: 2699-2856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: KE699220.1 Escherichia coli HVH 41 (4-2677849) genomic scaffold acYwL-supercont1.10, whole genome shotgun sequence (2681 bp)
Overview 1 RT 1: 1-1756 bp Neighborhood of RT #1 [1, 2001] PHA02517 RVT-GII GIIM Feature: gene Location: 1-361 bp Ori: EQO52469.1 Feature: domain Description: PHA02517 Location: 4-361 bp Feature: domain Description: PHA02517 Location: 4-3 61 bp Feature: gene Location: 478-2001 bp Ori: EQO52470.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751-1483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751-1483 bp Feature: domain Description: GIIM Note: maturase Location: 1558-1756 bp Feature: domain Description: GIIM Note: maturase Location: 1558-1756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)