myRT

myRT report for GCA_000456925.1_Esch_coli_HVH_63_4-2542528_V1

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Seq: KE699369.1 Escherichia coli HVH 63 (4-2542528) genomic scaffold acXuC-supercont1.12, whole genome shotgun sequence (143048 bp)
Overview 1 RT 1: 130081-132762 bp Neighborhood of RT #1 [130081, 132764] PRK10173 PRK10173 RVT-GII PHA02517 InsE Feature: gene Location: 130081-130530 bp Ori: EQP16227.1 Feature: domain Description: PRK10173 Location: 130084-130522 bp Feature: domain Description: PRK1 01 73 Location: 1 30084-1 30522 bp Feature: gene Location: 130505-130825 bp Ori: EQP16228.1 Feature: domain Description: PRK10173 Location: 130508-130736 bp Feature: domain Description: PRK1 01 73 Location: 1 30508-1 30736 bp Feature: gene Location: 130864-131367 bp Ori: EQP16229.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131137-131206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 1 37-1 31 206 bp Feature: gene Location: 131959-132438 bp Ori: EQP16230.1 Feature: domain Description: PHA02517 Location: 132019-132373 bp Feature: domain Description: PHA0251 7 Location: 1 3201 9-1 32373 bp Feature: gene Location: 132438-132764 bp Ori: EQP16231.1 Feature: domain Description: InsE Location: 132441-132762 bp Feature: domain Description: InsE Location: 1 32441 -1 32762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: KE699370.1 Escherichia coli HVH 63 (4-2542528) genomic scaffold acXuC-supercont1.2, whole genome shotgun sequence (3179698 bp)
Overview 1 RT 1: 36240-42459 bp 2 RT 2: 2076973-2084868 bp Neighborhood of RT #1 [36240, 42459] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Neighborhood of RT #2 [2076973, 2084868] IS5 AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 36240-37202 bp Feature: gene Location: 37515-38471 bp Ori: EQP27255.1 Feature: domain Description: YhhI Location: 37518-37863 bp Feature: domain Description: YhhI Location: 37518-37863 bp Feature: domain Description: YhhI Location: 37920-38274 bp Feature: domain Description: YhhI Location: 3792 0-382 74 bp Feature: domain Description: YhhI Location: 38274-38454 bp Feature: domain Description: YhhI Location: 382 74-38454 bp Feature: gene Location: 39003-40253 bp Ori: EQP27256.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39207-39864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392 07-39864 bp Feature: domain Description: GIIM Note: maturase Location: 39945-40167 bp Feature: domain Description: GIIM Note: maturase Location: 39945-40167 bp Feature: gene Location: 40700-41836 bp Ori: EQP27257.1 Feature: domain Description: YhhI Location: 40703-41066 bp Feature: domain Description: YhhI Location: 40703-41066 bp Feature: domain Description: YhhI Location: 41123-41477 bp Feature: domain Description: YhhI Location: 4112 3-41477 bp Feature: domain Description: YhhI Location: 41495-41738 bp Feature: domain Description: YhhI Location: 41495-41738 bp Feature: gene Location: 41956-42459 bp Feature: gene Location: 2076973-2077953 bp Ori: EQP23838.1 Feature: domain Description: IS5 Location: 2077162-2077939 bp Feature: domain Description: IS5 Location: 2 077162 -2 077939 bp Feature: gene Location: 2079634-2081880 bp Ori: EQP23839.1 Feature: domain Description: AAA_15 Location: 2079637-2080645 bp Feature: domain Description: AAA_15 Location: 2 079637-2 080645 bp Feature: gene Location: 2081995-2083095 bp Ori: EQP23840.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2082175-2082709 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 082 175-2 082 709 bp Feature: gene Location: 2083751-2084620 bp Ori: EQP23841.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 2084273-2084444 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 0842 73-2 084444 bp Feature: gene Location: 2084617-2084868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), IS5 (COG3039), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)