myRT

myRT report for GCA_000456945.1_Esch_coli_HVH_65_4-2262045_V1

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Seq: KE699380.1 Escherichia coli HVH 65 (4-2262045) genomic scaffold acXuy-supercont1.3, whole genome shotgun sequence (113284 bp)
Overview 1 RT 1: 10480-14733 bp 2 RT 2: 25635-29423 bp Neighborhood of RT #1 [10480, 14783] PRK10173 PRK10173 RVT-GII COG4584 PRK09183 Neighborhood of RT #2 [25635, 29461] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 10480-10929 bp Ori: EQP27114.1 Feature: domain Description: PRK10173 Location: 10483-10921 bp Feature: domain Description: PRK1 01 73 Location: 1 0483-1 0921 bp Feature: gene Location: 10904-11224 bp Ori: EQP27115.1 Feature: domain Description: PRK10173 Location: 10907-11135 bp Feature: domain Description: PRK1 01 73 Location: 1 0907-1 1 1 35 bp Feature: gene Location: 11263-11766 bp Ori: EQP27116.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11536-11605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 536-1 1 605 bp Feature: gene Location: 12814-13986 bp Ori: EQP27117.1 Feature: domain Description: COG4584 Location: 12817-13654 bp Feature: domain Description: COG4584 Location: 1 281 7-1 3654 bp Feature: gene Location: 13986-14783 bp Ori: EQP27118.1 Feature: domain Description: PRK09183 Location: 13998-14733 bp Feature: domain Description: PRK091 83 Location: 1 3998-1 4733 bp Feature: gene Location: 25635-25961 bp Ori: EQP27133.1 Feature: domain Description: InsE Location: 25638-25959 bp Feature: domain Description: InsE Location: 25638-25959 bp Feature: gene Location: 25961-26440 bp Ori: EQP27134.1 Feature: domain Description: PHA02517 Location: 26021-26375 bp Feature: domain Description: PHA0251 7 Location: 26021 -26375 bp Feature: gene Location: 27032-28555 bp Ori: EQP27135.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27305-28037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27305-28037 bp Feature: domain Description: GIIM Note: maturase Location: 28112-28310 bp Feature: domain Description: GIIM Note: maturase Location: 281 1 2-2831 0 bp Feature: gene Location: 28672-29028 bp Ori: EQP27136.1 Feature: domain Description: PHA02517 Location: 28675-28984 bp Feature: domain Description: PHA0251 7 Location: 28675-28984 bp Feature: gene Location: 29057-29461 bp Ori: EQP27137.1 Feature: domain Description: InsE Location: 29087-29423 bp Feature: domain Description: InsE Location: 29087-29423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)

Seq: KE699378.1 Escherichia coli HVH 65 (4-2262045) genomic scaffold acXuy-supercont1.1, whole genome shotgun sequence (1314731 bp)
Overview 1 RT 1: 294633-300664 bp Neighborhood of RT #1 [294633, 300801] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 294633-294773 bp Ori: EQP43296.1 Feature: domain Description: SfsB Location: 294642-294714 bp Feature: domain Description: SfsB Location: 2 94642 -2 94714 bp Feature: gene Location: 294770-295240 bp Feature: gene Location: 295587-298796 bp Ori: EQP43298.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 296115-296604 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 96115-2 96604 bp Feature: domain Description: nitrilase Location: 298110-298707 bp Feature: domain Description: nitrilase Location: 2 98110-2 98707 bp Feature: gene Location: 299112-299894 bp Ori: EQP43299.1 Feature: domain Description: AbiEi_3_N Location: 299124-299385 bp Feature: domain Description: AbiEi_3_N Location: 2 9912 4-2 99385 bp Feature: domain Description: AbiEi_3 Location: 299397-299853 bp Feature: domain Description: AbiEi_3 Location: 2 99397-2 99853 bp Feature: gene Location: 299881-300801 bp Ori: EQP43300.1 Feature: domain Description: AbiEii Location: 299923-300664 bp Feature: domain Description: AbiEii Location: 2 9992 3-300664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)