myRT

myRT report for GCA_000457535.1_Esch_coli_HVH_110_4-6978754_V1

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Seq: KE699796.1 Escherichia coli HVH 110 (4-6978754) genomic scaffold acXvh-supercont1.15, whole genome shotgun sequence (156242 bp)
Overview 1 RT 1: 24175-27999 bp 2 RT 2: 38338-41013 bp Neighborhood of RT #1 [24175, 28001] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [38338, 41021] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 24175-24579 bp Ori: EQQ61298.1 Feature: domain Description: InsE Location: 24205-24541 bp Feature: domain Description: InsE Location: 24205-24541 bp Feature: gene Location: 24608-24964 bp Ori: EQQ61299.1 Feature: domain Description: PHA02517 Location: 24611-24920 bp Feature: domain Description: PHA0251 7 Location: 2461 1 -24920 bp Feature: gene Location: 25081-26604 bp Ori: EQQ61300.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25354-26086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25354-26086 bp Feature: domain Description: GIIM Note: maturase Location: 26161-26359 bp Feature: domain Description: GIIM Note: maturase Location: 261 61 -26359 bp Feature: gene Location: 27196-27675 bp Ori: EQQ61301.1 Feature: domain Description: PHA02517 Location: 27256-27610 bp Feature: domain Description: PHA0251 7 Location: 27256-2761 0 bp Feature: gene Location: 27675-28001 bp Ori: EQQ61302.1 Feature: domain Description: InsE Location: 27678-27999 bp Feature: domain Description: InsE Location: 27678-27999 bp Feature: gene Location: 38338-38664 bp Ori: EQQ61315.1 Feature: domain Description: InsE Location: 38341-38662 bp Feature: domain Description: InsE Location: 38341 -38662 bp Feature: gene Location: 38664-39143 bp Ori: EQQ61316.1 Feature: domain Description: PHA02517 Location: 38724-39078 bp Feature: domain Description: PHA0251 7 Location: 38724-39078 bp Feature: gene Location: 39735-40238 bp Ori: EQQ61317.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40008-40077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40008-40077 bp Feature: gene Location: 40277-40597 bp Ori: EQQ61318.1 Feature: domain Description: PRK10173 Location: 40280-40508 bp Feature: domain Description: PRK1 01 73 Location: 40280-40508 bp Feature: gene Location: 40572-41021 bp Ori: EQQ61319.1 Feature: domain Description: PRK10173 Location: 40575-41013 bp Feature: domain Description: PRK1 01 73 Location: 40575-41 01 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: KE699797.1 Escherichia coli HVH 110 (4-6978754) genomic scaffold acXvh-supercont1.2, whole genome shotgun sequence (2819494 bp)
Overview 1 RT 1: 36240-42459 bp 2 RT 2: 2143845-2151497 bp Neighborhood of RT #1 [36240, 42459] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Neighborhood of RT #2 [2143845, 2151497] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 36240-37202 bp Feature: gene Location: 37515-38471 bp Ori: EQQ69138.1 Feature: domain Description: YhhI Location: 37518-37863 bp Feature: domain Description: YhhI Location: 37518-37863 bp Feature: domain Description: YhhI Location: 37920-38274 bp Feature: domain Description: YhhI Location: 3792 0-382 74 bp Feature: domain Description: YhhI Location: 38274-38454 bp Feature: domain Description: YhhI Location: 382 74-38454 bp Feature: gene Location: 39003-40253 bp Ori: EQQ69139.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39207-39864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392 07-39864 bp Feature: domain Description: GIIM Note: maturase Location: 39945-40167 bp Feature: domain Description: GIIM Note: maturase Location: 39945-40167 bp Feature: gene Location: 40700-41836 bp Ori: EQQ69140.1 Feature: domain Description: YhhI Location: 40703-41066 bp Feature: domain Description: YhhI Location: 40703-41066 bp Feature: domain Description: YhhI Location: 41123-41477 bp Feature: domain Description: YhhI Location: 4112 3-41477 bp Feature: domain Description: YhhI Location: 41495-41738 bp Feature: domain Description: YhhI Location: 41495-41738 bp Feature: gene Location: 41956-42459 bp Feature: gene Location: 2143845-2144864 bp Ori: EQQ65648.1 Feature: domain Description: DUF4917 Location: 2143905-2144829 bp Feature: domain Description: DUF4917 Location: 2 143905-2 14482 9 bp Feature: gene Location: 2146263-2148509 bp Ori: EQQ65649.1 Feature: domain Description: AAA_15 Location: 2146266-2147274 bp Feature: domain Description: AAA_15 Location: 2 1462 66-2 1472 74 bp Feature: gene Location: 2148624-2149724 bp Ori: EQQ65650.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2148804-2149338 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 148804-2 149338 bp Feature: gene Location: 2150380-2151249 bp Ori: EQQ65651.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 2150902-2151073 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 150902 -2 151073 bp Feature: gene Location: 2151246-2151497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)