myRT

myRT report for GCA_000457735.1_Esch_coli_HVH_119_4-6879578_V1

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Seq: KE699933.1 Escherichia coli HVH 119 (4-6879578) genomic scaffold acYyF-supercont1.1, whole genome shotgun sequence (1402947 bp)
Overview 1 RT 1: 1129434-1135653 bp Neighborhood of RT #1 [1129434, 1135653] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 1129434-1129937 bp Feature: gene Location: 1130057-1131193 bp Ori: EQR23242.1 Feature: domain Description: YhhI Location: 1130060-1130423 bp Feature: domain Description: YhhI Location: 1 1 30060-1 1 30423 bp Feature: domain Description: YhhI Location: 1130480-1130834 bp Feature: domain Description: YhhI Location: 1 1 30480-1 1 30834 bp Feature: domain Description: YhhI Location: 1130852-1131095 bp Feature: domain Description: YhhI Location: 1 1 30852-1 1 31 095 bp Feature: gene Location: 1131640-1132890 bp Ori: EQR23243.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1131844-1132501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 31 844-1 1 32501 bp Feature: domain Description: GIIM Note: maturase Location: 1132582-1132804 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 32582-1 1 32804 bp Feature: gene Location: 1133422-1134378 bp Ori: EQR23244.1 Feature: domain Description: YhhI Location: 1133425-1133770 bp Feature: domain Description: YhhI Location: 1 1 33425-1 1 33770 bp Feature: domain Description: YhhI Location: 1133827-1134181 bp Feature: domain Description: YhhI Location: 1 1 33827-1 1 341 81 bp Feature: domain Description: YhhI Location: 1134181-1134361 bp Feature: domain Description: YhhI Location: 1 1 341 81 -1 1 34361 bp Feature: gene Location: 1134691-1135653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: KE699937.1 Escherichia coli HVH 119 (4-6879578) genomic scaffold acYyF-supercont1.2, whole genome shotgun sequence (2478079 bp)
Overview 1 RT 1: 955563-963215 bp Neighborhood of RT #1 [955563, 963215] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 955563-956582 bp Ori: EQR21584.1 Feature: domain Description: DUF4917 Location: 955623-956547 bp Feature: domain Description: DUF4917 Location: 95562 3-956547 bp Feature: gene Location: 957981-960227 bp Ori: EQR21585.1 Feature: domain Description: AAA_15 Location: 957984-958992 bp Feature: domain Description: AAA_15 Location: 957984-958992 bp Feature: gene Location: 960342-961442 bp Ori: EQR21586.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 960522-961056 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96052 2 -961056 bp Feature: gene Location: 962098-962967 bp Ori: EQR21587.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 962620-962791 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 962 62 0-962 791 bp Feature: gene Location: 962964-963215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: KE699936.1 Escherichia coli HVH 119 (4-6879578) genomic scaffold acYyF-supercont1.12, whole genome shotgun sequence (112692 bp)
Overview 1 RT 1: 76908-80543 bp 2 RT 2: 89218-91893 bp Neighborhood of RT #1 [76908, 80545] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [89218, 91901] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 76908-77312 bp Ori: EQR12997.1 Feature: domain Description: InsE Location: 76938-77274 bp Feature: domain Description: InsE Location: 7693 8-77274 bp Feature: gene Location: 77341-77697 bp Ori: EQR12998.1 Feature: domain Description: PHA02517 Location: 77344-77653 bp Feature: domain Description: PHA02517 Location: 773 44-77653 bp Feature: gene Location: 77814-79337 bp Ori: EQR12999.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78087-78819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78087-78819 bp Feature: domain Description: GIIM Note: maturase Location: 78894-79092 bp Feature: domain Description: GIIM Note: maturase Location: 78894-79092 bp Feature: gene Location: 79929-80408 bp Ori: EQR13000.1 Feature: domain Description: PHA02517 Location: 79989-80343 bp Feature: domain Description: PHA02517 Location: 79989-803 43 bp Feature: gene Location: 80408-80545 bp Ori: EQR13001.1 Feature: domain Description: InsE Location: 80417-80543 bp Feature: domain Description: InsE Location: 80417-80543 bp Feature: gene Location: 89218-89544 bp Ori: EQR12530.1 Feature: domain Description: InsE Location: 89221-89542 bp Feature: domain Description: InsE Location: 89221-89542 bp Feature: gene Location: 89544-90023 bp Ori: EQR12531.1 Feature: domain Description: PHA02517 Location: 89604-89958 bp Feature: domain Description: PHA02517 Location: 89604-89958 bp Feature: gene Location: 90615-91118 bp Ori: EQR12532.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90888-90957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90888-90957 bp Feature: gene Location: 91157-91477 bp Ori: EQR12533.1 Feature: domain Description: PRK10173 Location: 91160-91388 bp Feature: domain Description: PRK10173 Location: 91160-913 88 bp Feature: gene Location: 91452-91901 bp Ori: EQR12534.1 Feature: domain Description: PRK10173 Location: 91455-91893 bp Feature: domain Description: PRK10173 Location: 91455-91893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)