myRT

myRT report for GCA_000458215.1_Esch_coli_HVH_149_4-4451880_V1

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Seq: KE700250.1 Escherichia coli HVH 149 (4-4451880) genomic scaffold acYyI-supercont1.15, whole genome shotgun sequence (150925 bp)
Overview 1 RT 1: 123243-130525 bp Neighborhood of RT #1 [123243, 130530] rve PHA02517 RVT-GII GIIM Tra5 InsE Feature: gene Location: 123243-124742 bp Feature: domain Description: rve Location: 123615-124008 bp Feature: domain Description: rve Location: 1 2361 5-1 24008 bp Feature: gene Location: 126673-127152 bp Feature: domain Description: PHA02517 Location: 126733-127087 bp Feature: domain Description: PHA0251 7 Location: 1 26733-1 27087 bp Feature: gene Location: 127744-129267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128017-128749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2801 7-1 28749 bp Feature: domain Description: GIIM Note: maturase Location: 128824-129022 bp Feature: domain Description: GIIM Note: maturase Location: 1 28824-1 29022 bp Feature: gene Location: 129587-130234 bp Feature: domain Description: Tra5 Location: 129698-130208 bp Feature: domain Description: Tra5 Location: 1 29698-1 30208 bp Feature: gene Location: 130231-130530 bp Feature: domain Description: InsE Location: 130258-130525 bp Feature: domain Description: InsE Location: 1 30258-1 30525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801), InsE (COG2963)

Seq: KE700253.1 Escherichia coli HVH 149 (4-4451880) genomic scaffold acYyI-supercont1.4, whole genome shotgun sequence (578742 bp)
Overview 1 RT 1: 246821-251176 bp Neighborhood of RT #1 [246821, 251199] HTH_XRE RVT-Retrons PRK13889 TraD Feature: gene Location: 246821-247036 bp Feature: gene Location: 247127-247408 bp Feature: domain Description: HTH_XRE Location: 247142-247307 bp Feature: domain Description: HTH_XRE Location: 2 47142 -2 47307 bp Feature: gene Location: 247401-248501 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 247542-248094 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 47542 -2 48094 bp Feature: gene Location: 248578-250080 bp Feature: domain Description: PRK13889 Location: 248581-249160 bp Feature: domain Description: PRK13889 Location: 2 48581-2 49160 bp Feature: gene Location: 250888-251199 bp Feature: domain Description: TraD Location: 251002-251176 bp Feature: domain Description: TraD Location: 2 51002 -2 51176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional), TraD (pfam06412)

Seq: KE700252.1 Escherichia coli HVH 149 (4-4451880) genomic scaffold acYyI-supercont1.3, whole genome shotgun sequence (2143100 bp)
Overview 1 RT 1: 1877581-1882119 bp Neighborhood of RT #1 [1877581, 1882119] InsE PHA02517 RVT-GII GIIM YeeP Feature: gene Location: 1877581-1877883 bp Feature: domain Description: InsE Location: 1877590-1877872 bp Feature: domain Description: InsE Location: 1877590-1877872 bp Feature: gene Location: 1878096-1878335 bp Feature: domain Description: PHA02517 Location: 1878099-1878270 bp Feature: domain Description: PHA02517 Location: 1878099-1878270 bp Feature: gene Location: 1878927-1880450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1879200-1879932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1879200-187993 2 bp Feature: domain Description: GIIM Note: maturase Location: 1880007-1880205 bp Feature: domain Description: GIIM Note: maturase Location: 1880007-1880205 bp Feature: gene Location: 1881029-1881322 bp Feature: domain Description: YeeP Location: 1881041-1881317 bp Feature: domain Description: YeeP Location: 1881041-18813 17 bp Feature: gene Location: 1881334-1882119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), YeeP (COG3596)