myRT

myRT report for GCA_000458315.1_Esch_coli_HVH_155_4-4509048_V1

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Seq: KE700351.1 Escherichia coli HVH 155 (4-4509048) genomic scaffold acYzt-supercont1.9, whole genome shotgun sequence (115394 bp)
Overview 1 RT 1: 7447-11271 bp 2 RT 2: 21610-24285 bp Neighborhood of RT #1 [7447, 11273] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [21610, 24293] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 7447-7851 bp Ori: ERA62973.1 Feature: domain Description: InsE Location: 7477-7813 bp Feature: domain Description: InsE Location: 7477-781 3 bp Feature: gene Location: 7880-8236 bp Ori: ERA62974.1 Feature: domain Description: PHA02517 Location: 7883-8192 bp Feature: domain Description: PHA0251 7 Location: 7883-81 92 bp Feature: gene Location: 8353-9876 bp Ori: ERA62975.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8626-9358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8626-9358 bp Feature: domain Description: GIIM Note: maturase Location: 9433-9631 bp Feature: domain Description: GIIM Note: maturase Location: 9433-9631 bp Feature: gene Location: 10468-10947 bp Ori: ERA62976.1 Feature: domain Description: PHA02517 Location: 10528-10882 bp Feature: domain Description: PHA0251 7 Location: 1 0528-1 0882 bp Feature: gene Location: 10947-11273 bp Ori: ERA62977.1 Feature: domain Description: InsE Location: 10950-11271 bp Feature: domain Description: InsE Location: 1 0950-1 1 271 bp Feature: gene Location: 21610-21936 bp Ori: ERA62990.1 Feature: domain Description: InsE Location: 21613-21934 bp Feature: domain Description: InsE Location: 21 61 3-21 934 bp Feature: gene Location: 21936-22415 bp Ori: ERA62991.1 Feature: domain Description: PHA02517 Location: 21996-22350 bp Feature: domain Description: PHA0251 7 Location: 21 996-22350 bp Feature: gene Location: 23007-23510 bp Ori: ERA62992.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23280-23349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23280-23349 bp Feature: gene Location: 23549-23869 bp Ori: ERA62993.1 Feature: domain Description: PRK10173 Location: 23552-23780 bp Feature: domain Description: PRK1 01 73 Location: 23552-23780 bp Feature: gene Location: 23844-24293 bp Ori: ERA62994.1 Feature: domain Description: PRK10173 Location: 23847-24285 bp Feature: domain Description: PRK1 01 73 Location: 23847-24285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: KE700344.1 Escherichia coli HVH 155 (4-4509048) genomic scaffold acYzt-supercont1.2, whole genome shotgun sequence (3591830 bp)
Overview 1 RT 1: 36240-42459 bp 2 RT 2: 2095186-2102838 bp Neighborhood of RT #1 [36240, 42459] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Neighborhood of RT #2 [2095186, 2102838] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 36240-37202 bp Feature: gene Location: 37515-38471 bp Ori: ERA69552.1 Feature: domain Description: YhhI Location: 37518-37863 bp Feature: domain Description: YhhI Location: 37518-37863 bp Feature: domain Description: YhhI Location: 37920-38274 bp Feature: domain Description: YhhI Location: 3792 0-382 74 bp Feature: domain Description: YhhI Location: 38274-38454 bp Feature: domain Description: YhhI Location: 382 74-38454 bp Feature: gene Location: 39003-40253 bp Ori: ERA69553.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39207-39864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392 07-39864 bp Feature: domain Description: GIIM Note: maturase Location: 39945-40167 bp Feature: domain Description: GIIM Note: maturase Location: 39945-40167 bp Feature: gene Location: 40700-41836 bp Ori: ERA69554.1 Feature: domain Description: YhhI Location: 40703-41066 bp Feature: domain Description: YhhI Location: 40703-41066 bp Feature: domain Description: YhhI Location: 41123-41477 bp Feature: domain Description: YhhI Location: 4112 3-41477 bp Feature: domain Description: YhhI Location: 41495-41738 bp Feature: domain Description: YhhI Location: 41495-41738 bp Feature: gene Location: 41956-42459 bp Feature: gene Location: 2095186-2096205 bp Ori: ERA66352.1 Feature: domain Description: DUF4917 Location: 2095246-2096170 bp Feature: domain Description: DUF4917 Location: 2 0952 46-2 096170 bp Feature: gene Location: 2097604-2099850 bp Ori: ERA66353.1 Feature: domain Description: AAA_15 Location: 2097607-2098615 bp Feature: domain Description: AAA_15 Location: 2 097607-2 098615 bp Feature: gene Location: 2099965-2101065 bp Ori: ERA66354.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2100145-2100679 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 100145-2 100679 bp Feature: gene Location: 2101721-2102590 bp Ori: ERA66355.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 2102243-2102414 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 102 2 43-2 102 414 bp Feature: gene Location: 2102587-2102838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)