myRT

myRT report for GCA_000458475.1_Esch_coli_HVH_163_4-4697553_V1

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Seq: KE700461.1 Escherichia coli HVH 163 (4-4697553) genomic scaffold acYzB-supercont1.1, whole genome shotgun sequence (4693653 bp)
Overview 1 RT 1: 2307300-2314917 bp 2 RT 2: 4420330-4426549 bp Neighborhood of RT #1 [2307300, 2314952] Nuc_deoxyrib_tr RVT-Retrons AAA_15 DUF4917 Neighborhood of RT #2 [4420330, 4426549] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 2307300-2307551 bp Feature: gene Location: 2307548-2308417 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2308070-2308241 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2308070-2308241 bp Feature: gene Location: 2309073-2310173 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2309256-2309784 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2309256-2309784 bp Feature: gene Location: 2310288-2312534 bp Feature: domain Description: AAA_15 Location: 2310291-2311299 bp Feature: domain Description: AAA_1 5 Location: 231 0291 -231 1 299 bp Feature: gene Location: 2313933-2314952 bp Feature: domain Description: DUF4917 Location: 2313993-2314917 bp Feature: domain Description: DUF491 7 Location: 231 3993-231 491 7 bp Feature: gene Location: 4420330-4420833 bp Feature: gene Location: 4420953-4422089 bp Feature: domain Description: YhhI Location: 4420956-4421319 bp Feature: domain Description: YhhI Location: 4420956-4421 31 9 bp Feature: domain Description: YhhI Location: 4421376-4421730 bp Feature: domain Description: YhhI Location: 4421 376-4421 730 bp Feature: domain Description: YhhI Location: 4421748-4421991 bp Feature: domain Description: YhhI Location: 4421 748-4421 991 bp Feature: gene Location: 4422536-4423786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4422740-4423397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4422740-4423397 bp Feature: domain Description: GIIM Note: maturase Location: 4423478-4423700 bp Feature: domain Description: GIIM Note: maturase Location: 4423478-4423700 bp Feature: gene Location: 4424318-4425274 bp Feature: domain Description: YhhI Location: 4424321-4424666 bp Feature: domain Description: YhhI Location: 4424321 -4424666 bp Feature: domain Description: YhhI Location: 4424723-4425077 bp Feature: domain Description: YhhI Location: 4424723-4425077 bp Feature: domain Description: YhhI Location: 4425077-4425257 bp Feature: domain Description: YhhI Location: 4425077-4425257 bp Feature: gene Location: 4425587-4426549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263), YhhI (COG5433), RVT-GII, GIIM (pfam08388)