myRT

myRT report for GCA_000458645.1_Esch_coli_HVH_175_4-3405184_V1

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Seq: KE700563.1 Escherichia coli HVH 175 (4-3405184) genomic scaffold acYwQ-supercont1.21, whole genome shotgun sequence (6764 bp)
Overview 1 RT 1: 1052-6036 bp Neighborhood of RT #1 [1052, 6074] rve PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 1052-2551 bp Feature: domain Description: rve Location: 1424-1817 bp Feature: domain Description: rve Location: 1 424-1 81 7 bp Feature: gene Location: 2772-3053 bp Feature: domain Description: PHA02517 Location: 2775-2988 bp Feature: domain Description: PHA0251 7 Location: 2775-2988 bp Feature: gene Location: 3645-5168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3918-4650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391 8-4650 bp Feature: domain Description: GIIM Note: maturase Location: 4725-4923 bp Feature: domain Description: GIIM Note: maturase Location: 4725-4923 bp Feature: gene Location: 5285-5641 bp Feature: domain Description: PHA02517 Location: 5288-5597 bp Feature: domain Description: PHA0251 7 Location: 5288-5597 bp Feature: gene Location: 5670-6074 bp Feature: domain Description: InsE Location: 5700-6036 bp Feature: domain Description: InsE Location: 5700-6036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: KE700560.1 Escherichia coli HVH 175 (4-3405184) genomic scaffold acYwQ-supercont1.19, whole genome shotgun sequence (80865 bp)
Overview 1 RT 1: 11149-15651 bp Neighborhood of RT #1 [11149, 15704] RVT-GII GIIM PHA02517 autotrans_barl Feature: gene Location: 11149-11225 bp Feature: gene Location: 12046-12454 bp Feature: gene Location: 13046-14569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13319-14051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13319-14051 bp Feature: domain Description: GIIM Note: maturase Location: 14126-14324 bp Feature: domain Description: GIIM Note: maturase Location: 1412 6-1432 4 bp Feature: gene Location: 14686-15132 bp Feature: domain Description: PHA02517 Location: 14689-15130 bp Feature: domain Description: PHA02 517 Location: 14689-15130 bp Feature: gene Location: 15135-15704 bp Feature: domain Description: autotrans_barl Location: 15216-15651 bp Feature: domain Description: autotrans_barl Location: 152 16-15651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), autotrans_barl (TIGR01414)

Seq: KE700569.1 Escherichia coli HVH 175 (4-3405184) genomic scaffold acYwQ-supercont1.8, whole genome shotgun sequence (84199 bp)
Overview 1 RT 1: 20853-25628 bp 2 RT 2: 31921-37235 bp Neighborhood of RT #1 [20853, 25639] Tra8 PHA02517 RVT-GII GIIM PHA02517 COG3440 Neighborhood of RT #2 [31921, 37240] RVT-GII GIIM LacI PBP1_GntR PtsN Feature: gene Location: 20853-21584 bp Feature: domain Description: Tra8 Location: 20856-21573 bp Feature: domain Description: Tra8 Location: 20856-21573 bp Feature: gene Location: 21846-22085 bp Feature: domain Description: PHA02517 Location: 21849-22020 bp Feature: domain Description: PHA02517 Location: 21849-22020 bp Feature: gene Location: 22677-24200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22950-23682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22950-23 682 bp Feature: domain Description: GIIM Note: maturase Location: 23757-23955 bp Feature: domain Description: GIIM Note: maturase Location: 23 757-23 955 bp Feature: gene Location: 24395-24769 bp Feature: domain Description: PHA02517 Location: 24398-24758 bp Feature: domain Description: PHA02517 Location: 243 98-24758 bp Feature: gene Location: 24803-25639 bp Feature: domain Description: COG3440 Location: 24815-25628 bp Feature: domain Description: COG3 440 Location: 24815-25628 bp Feature: gene Location: 31921-32265 bp Feature: gene Location: 32475-32801 bp Feature: gene Location: 34048-34968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34117-34528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 4117-3 4528 bp Feature: domain Description: GIIM Note: maturase Location: 34576-34801 bp Feature: domain Description: GIIM Note: maturase Location: 3 4576-3 4801 bp Feature: gene Location: 35495-36526 bp Feature: domain Description: LacI Location: 35537-35672 bp Feature: domain Description: LacI Location: 3 553 7-3 5672 bp Feature: domain Description: PBP1_GntR Location: 35711-36521 bp Feature: domain Description: PBP1_GntR Location: 3 5711-3 6521 bp Feature: gene Location: 36797-37240 bp Feature: domain Description: PtsN Location: 36800-37235 bp Feature: domain Description: PtsN Location: 3 6800-3 723 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3440 (Predicted restriction endonuclease ), LacI (pfam00356), PBP1_GntR (cd01575), PtsN (COG1762)