myRT

myRT report for GCA_000458725.1_Esch_coli_HVH_183_4-3205932_V1

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Seq: KE700616.1 Escherichia coli HVH 183 (4-3205932) genomic scaffold acYze-supercont1.14, whole genome shotgun sequence (107994 bp)
Overview 1 RT 1: 2195-5983 bp Neighborhood of RT #1 [2195, 6021] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 2195-2521 bp Feature: domain Description: InsE Location: 2198-2519 bp Feature: domain Description: InsE Location: 21 98-251 9 bp Feature: gene Location: 2521-3000 bp Feature: domain Description: PHA02517 Location: 2581-2935 bp Feature: domain Description: PHA0251 7 Location: 2581 -2935 bp Feature: gene Location: 3592-5115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3865-4597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3865-4597 bp Feature: domain Description: GIIM Note: maturase Location: 4672-4870 bp Feature: domain Description: GIIM Note: maturase Location: 4672-4870 bp Feature: gene Location: 5232-5588 bp Feature: domain Description: PHA02517 Location: 5235-5544 bp Feature: domain Description: PHA0251 7 Location: 5235-5544 bp Feature: gene Location: 5617-6021 bp Feature: domain Description: InsE Location: 5647-5983 bp Feature: domain Description: InsE Location: 5647-5983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: KE700611.1 Escherichia coli HVH 183 (4-3205932) genomic scaffold acYze-supercont1.1, whole genome shotgun sequence (671252 bp)
Overview 1 RT 1: 397929-404148 bp Neighborhood of RT #1 [397929, 404148] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 397929-398432 bp Feature: gene Location: 398552-399688 bp Feature: domain Description: YhhI Location: 398555-398918 bp Feature: domain Description: YhhI Location: 398555-398918 bp Feature: domain Description: YhhI Location: 398975-399329 bp Feature: domain Description: YhhI Location: 398975-39932 9 bp Feature: domain Description: YhhI Location: 399347-399590 bp Feature: domain Description: YhhI Location: 399347-399590 bp Feature: gene Location: 400135-401385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400339-400996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400339-400996 bp Feature: domain Description: GIIM Note: maturase Location: 401077-401299 bp Feature: domain Description: GIIM Note: maturase Location: 401077-4012 99 bp Feature: gene Location: 401917-402873 bp Feature: domain Description: YhhI Location: 401920-402265 bp Feature: domain Description: YhhI Location: 40192 0-402 2 65 bp Feature: domain Description: YhhI Location: 402322-402676 bp Feature: domain Description: YhhI Location: 402 32 2 -402 676 bp Feature: domain Description: YhhI Location: 402676-402856 bp Feature: domain Description: YhhI Location: 402 676-402 856 bp Feature: gene Location: 403186-404148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: KE700619.1 Escherichia coli HVH 183 (4-3205932) genomic scaffold acYze-supercont1.4, whole genome shotgun sequence (3688644 bp)
Overview 1 RT 1: 795108-802760 bp Neighborhood of RT #1 [795108, 802760] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 795108-796127 bp Feature: domain Description: DUF4917 Location: 795168-796092 bp Feature: domain Description: DUF4917 Location: 795168-796092 bp Feature: gene Location: 797526-799772 bp Feature: domain Description: AAA_15 Location: 797529-798537 bp Feature: domain Description: AAA_15 Location: 797529-79853 7 bp Feature: gene Location: 799887-800987 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 800070-800598 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 800070-800598 bp Feature: gene Location: 801643-802137 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 801787-801961 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 801787-801961 bp Feature: gene Location: 802509-802760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)