myRT

myRT report for GCA_000458745.1_Esch_coli_HVH_184_4-3343286_V1

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Seq: KE700637.1 Escherichia coli HVH 184 (4-3343286) genomic scaffold acXuL-supercont1.20, whole genome shotgun sequence (102588 bp)
Overview 1 RT 1: 98930-102588 bp Neighborhood of RT #1 [98930, 102588] autotrans_barl PHA02517 RVT-GII GIIM Feature: gene Location: 98930-99499 bp Feature: domain Description: autotrans_barl Location: 99011-99446 bp Feature: domain Description: autotrans_barl Location: 9901 1 -99446 bp Feature: gene Location: 99502-99948 bp Feature: domain Description: PHA02517 Location: 99505-99946 bp Feature: domain Description: PHA0251 7 Location: 99505-99946 bp Feature: gene Location: 100065-101588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100338-101070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00338-1 01 070 bp Feature: domain Description: GIIM Note: maturase Location: 101145-101343 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 1 45-1 01 343 bp Feature: gene Location: 102180-102588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), autotrans_barl (TIGR01414), PHA02517 (putative transposase OrfB; Reviewed)

Seq: KE700646.1 Escherichia coli HVH 184 (4-3343286) genomic scaffold acXuL-supercont1.8, whole genome shotgun sequence (212415 bp)
Overview 1 RT 1: 182198-186973 bp 2 RT 2: 193266-198580 bp Neighborhood of RT #1 [182198, 186984] Tra8 PHA02517 RVT-GII GIIM PHA02517 COG3440 Neighborhood of RT #2 [193266, 198585] RVT-GII GIIM LacI PBP1_GntR PtsN Feature: gene Location: 182198-182929 bp Feature: domain Description: Tra8 Location: 182201-182918 bp Feature: domain Description: Tra8 Location: 182 2 01-182 918 bp Feature: gene Location: 183191-183430 bp Feature: domain Description: PHA02517 Location: 183194-183365 bp Feature: domain Description: PHA02 517 Location: 183194-183365 bp Feature: gene Location: 184022-185545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184295-185027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1842 95-18502 7 bp Feature: domain Description: GIIM Note: maturase Location: 185102-185300 bp Feature: domain Description: GIIM Note: maturase Location: 185102 -185300 bp Feature: gene Location: 185740-186114 bp Feature: domain Description: PHA02517 Location: 185743-186103 bp Feature: domain Description: PHA02 517 Location: 185743-186103 bp Feature: gene Location: 186148-186984 bp Feature: domain Description: COG3440 Location: 186160-186973 bp Feature: domain Description: COG3440 Location: 186160-186973 bp Feature: gene Location: 193266-193610 bp Feature: gene Location: 193820-194146 bp Feature: gene Location: 195393-196313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195462-195873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195462 -195873 bp Feature: domain Description: GIIM Note: maturase Location: 195921-196146 bp Feature: domain Description: GIIM Note: maturase Location: 19592 1-196146 bp Feature: gene Location: 196840-197871 bp Feature: domain Description: LacI Location: 196882-197017 bp Feature: domain Description: LacI Location: 196882 -197017 bp Feature: domain Description: PBP1_GntR Location: 197056-197866 bp Feature: domain Description: PBP1_GntR Location: 197056-197866 bp Feature: gene Location: 198142-198585 bp Feature: domain Description: PtsN Location: 198145-198580 bp Feature: domain Description: PtsN Location: 198145-198580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3440 (Predicted restriction endonuclease ), LacI (pfam00356), PBP1_GntR (cd01575), PtsN (COG1762)

Seq: KE700633.1 Escherichia coli HVH 184 (4-3343286) genomic scaffold acXuL-supercont1.17, whole genome shotgun sequence (20101 bp)
Overview 1 RT 1: 3101-8855 bp Neighborhood of RT #1 [3101, 8875] InsE PHA02517 RVT-GII GIIM rve PRK08181 Feature: gene Location: 3101-3505 bp Feature: domain Description: InsE Location: 3131-3467 bp Feature: domain Description: InsE Location: 3 13 1-3 467 bp Feature: gene Location: 3534-3890 bp Feature: domain Description: PHA02517 Location: 3537-3846 bp Feature: domain Description: PHA02517 Location: 3 53 7-3 846 bp Feature: gene Location: 4007-5530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4280-5012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4280-5012 bp Feature: domain Description: GIIM Note: maturase Location: 5087-5285 bp Feature: domain Description: GIIM Note: maturase Location: 5087-5285 bp Feature: gene Location: 6624-8123 bp Feature: domain Description: rve Location: 6996-7389 bp Feature: domain Description: rve Location: 6996-73 89 bp Feature: gene Location: 8120-8875 bp Feature: domain Description: PRK08181 Location: 8144-8855 bp Feature: domain Description: PRK08181 Location: 8144-8855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), rve (pfam00665), PRK08181 (transposase; Validated)

Seq: KE700645.1 Escherichia coli HVH 184 (4-3343286) genomic scaffold acXuL-supercont1.7, whole genome shotgun sequence (301910 bp)
Overview 1 RT 1: 219403-223426 bp Neighborhood of RT #1 [219403, 223428] EmrE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 219403-219732 bp Feature: domain Description: EmrE Location: 219421-219724 bp Feature: domain Description: EmrE Location: 2194 21-219724 bp Feature: gene Location: 219956-220402 bp Feature: domain Description: PHA02517 Location: 219959-220400 bp Feature: domain Description: PHA02517 Location: 219959-2204 00 bp Feature: gene Location: 220519-222042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220792-221524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220792-221524 bp Feature: domain Description: GIIM Note: maturase Location: 221599-221797 bp Feature: domain Description: GIIM Note: maturase Location: 221599-221797 bp Feature: gene Location: 222935-223102 bp Feature: domain Description: PHA02517 Location: 222995-223088 bp Feature: domain Description: PHA02517 Location: 222995-223088 bp Feature: gene Location: 223102-223428 bp Feature: domain Description: InsE Location: 223105-223426 bp Feature: domain Description: InsE Location: 223105-2234 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EmrE (pfam13536), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)