myRT

myRT report for GCA_000459035.1_Esch_coli_HVH_199_4-5670322_V1

Download annotations/find similar RTs

Seq: KE700830.1 Escherichia coli HVH 199 (4-5670322) genomic scaffold acYyk-supercont1.2, whole genome shotgun sequence (3736222 bp)
Overview 1 RT 1: 3373555-3378874 bp Neighborhood of RT #1 [3373555, 3378900] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 3373555-3374784 bp Ori: EQU06795.1 Feature: domain Description: YesM Location: 3374035-3374776 bp Feature: domain Description: YesM Location: 3374035-3374776 bp Feature: gene Location: 3374857-3375045 bp Feature: gene Location: 3375367-3375849 bp Ori: EQU06797.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3375376-3375616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3375376-337561 6 bp Feature: domain Description: GIIM Note: maturase Location: 3375664-3375844 bp Feature: domain Description: GIIM Note: maturase Location: 3375664-3375844 bp Feature: gene Location: 3375916-3376455 bp Ori: EQU06798.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3376246-3376324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3376246-3376324 bp Feature: gene Location: 3376941-3377846 bp Feature: gene Location: 3377983-3378900 bp Ori: EQU06800.1 Feature: domain Description: PFLE_PFLC Location: 3378019-3378874 bp Feature: domain Description: PFLE_PFLC Location: 337801 9-3378874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)

Seq: KE700832.1 Escherichia coli HVH 199 (4-5670322) genomic scaffold acYyk-supercont1.4, whole genome shotgun sequence (113971 bp)
Overview 1 RT 1: 41452-45276 bp 2 RT 2: 56102-60725 bp Neighborhood of RT #1 [41452, 45278] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [56102, 60733] PRK08181 rve RVT-GII PRK10173 PRK10173 Feature: gene Location: 41452-41856 bp Ori: EQU05662.1 Feature: domain Description: InsE Location: 41482-41818 bp Feature: domain Description: InsE Location: 41482 -41818 bp Feature: gene Location: 41885-42241 bp Ori: EQU05663.1 Feature: domain Description: PHA02517 Location: 41888-42197 bp Feature: domain Description: PHA02 517 Location: 41888-42 197 bp Feature: gene Location: 42358-43881 bp Ori: EQU05664.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42631-43363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 631-43363 bp Feature: domain Description: GIIM Note: maturase Location: 43438-43636 bp Feature: domain Description: GIIM Note: maturase Location: 43438-43636 bp Feature: gene Location: 44473-44952 bp Ori: EQU05665.1 Feature: domain Description: PHA02517 Location: 44533-44887 bp Feature: domain Description: PHA02 517 Location: 44533-44887 bp Feature: gene Location: 44952-45278 bp Ori: EQU05666.1 Feature: domain Description: InsE Location: 44955-45276 bp Feature: domain Description: InsE Location: 44955-452 76 bp Feature: gene Location: 56102-56857 bp Ori: EQU05679.1 Feature: domain Description: PRK08181 Location: 56126-56837 bp Feature: domain Description: PRK08181 Location: 5612 6-56837 bp Feature: gene Location: 56854-58353 bp Ori: EQU05680.1 Feature: domain Description: rve Location: 57226-57619 bp Feature: domain Description: rve Location: 572 2 6-57619 bp Feature: gene Location: 59447-59950 bp Ori: EQU05681.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59720-59792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5972 0-59792 bp Feature: gene Location: 59989-60309 bp Ori: EQU05682.1 Feature: domain Description: PRK10173 Location: 59992-60220 bp Feature: domain Description: PRK10173 Location: 59992 -602 2 0 bp Feature: gene Location: 60284-60733 bp Ori: EQU05683.1 Feature: domain Description: PRK10173 Location: 60287-60725 bp Feature: domain Description: PRK10173 Location: 602 87-6072 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK08181 (transposase; Validated), rve (pfam00665), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)