myRT

myRT report for GCA_000459215.1_Esch_coli_HVH_208_4-3112292_V1

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Seq: KE700913.1 Escherichia coli HVH 208 (4-3112292) genomic scaffold acYzI-supercont1.14, whole genome shotgun sequence (139967 bp)
Overview 1 RT 1: 92676-96500 bp 2 RT 2: 106839-109514 bp Neighborhood of RT #1 [92676, 96502] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [106839, 109522] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 92676-93080 bp Ori: EQU55280.1 Feature: domain Description: InsE Location: 92706-93042 bp Feature: domain Description: InsE Location: 92706-93042 bp Feature: gene Location: 93109-93465 bp Ori: EQU55281.1 Feature: domain Description: PHA02517 Location: 93112-93421 bp Feature: domain Description: PHA0251 7 Location: 931 1 2-93421 bp Feature: gene Location: 93582-95105 bp Ori: EQU55282.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93855-94587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93855-94587 bp Feature: domain Description: GIIM Note: maturase Location: 94662-94860 bp Feature: domain Description: GIIM Note: maturase Location: 94662-94860 bp Feature: gene Location: 95697-96176 bp Ori: EQU55283.1 Feature: domain Description: PHA02517 Location: 95757-96111 bp Feature: domain Description: PHA0251 7 Location: 95757-961 1 1 bp Feature: gene Location: 96176-96502 bp Ori: EQU55284.1 Feature: domain Description: InsE Location: 96179-96500 bp Feature: domain Description: InsE Location: 961 79-96500 bp Feature: gene Location: 106839-107165 bp Ori: EQU55297.1 Feature: domain Description: InsE Location: 106842-107163 bp Feature: domain Description: InsE Location: 1 06842-1 071 63 bp Feature: gene Location: 107165-107644 bp Ori: EQU55298.1 Feature: domain Description: PHA02517 Location: 107225-107579 bp Feature: domain Description: PHA0251 7 Location: 1 07225-1 07579 bp Feature: gene Location: 108236-108739 bp Ori: EQU55299.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108509-108578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08509-1 08578 bp Feature: gene Location: 108778-109098 bp Ori: EQU55300.1 Feature: domain Description: PRK10173 Location: 108781-109009 bp Feature: domain Description: PRK1 01 73 Location: 1 08781 -1 09009 bp Feature: gene Location: 109073-109522 bp Ori: EQU55301.1 Feature: domain Description: PRK10173 Location: 109076-109514 bp Feature: domain Description: PRK1 01 73 Location: 1 09076-1 0951 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: KE700914.1 Escherichia coli HVH 208 (4-3112292) genomic scaffold acYzI-supercont1.2, whole genome shotgun sequence (3673815 bp)
Overview 1 RT 1: 37382-43601 bp 2 RT 2: 2074003-2081655 bp Neighborhood of RT #1 [37382, 43601] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Neighborhood of RT #2 [2074003, 2081655] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 37382-38344 bp Feature: gene Location: 38657-39613 bp Ori: EQU62371.1 Feature: domain Description: YhhI Location: 38660-39005 bp Feature: domain Description: YhhI Location: 38660-39005 bp Feature: domain Description: YhhI Location: 39062-39416 bp Feature: domain Description: YhhI Location: 39062 -39416 bp Feature: domain Description: YhhI Location: 39416-39596 bp Feature: domain Description: YhhI Location: 39416-39596 bp Feature: gene Location: 40145-41395 bp Ori: EQU62372.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40349-41006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40349-41006 bp Feature: domain Description: GIIM Note: maturase Location: 41087-41309 bp Feature: domain Description: GIIM Note: maturase Location: 41087-41309 bp Feature: gene Location: 41842-42978 bp Ori: EQU62373.1 Feature: domain Description: YhhI Location: 41845-42208 bp Feature: domain Description: YhhI Location: 41845-42 2 08 bp Feature: domain Description: YhhI Location: 42265-42619 bp Feature: domain Description: YhhI Location: 42 2 65-42 619 bp Feature: domain Description: YhhI Location: 42637-42880 bp Feature: domain Description: YhhI Location: 42 637-42 880 bp Feature: gene Location: 43098-43601 bp Feature: gene Location: 2074003-2075022 bp Ori: EQU58578.1 Feature: domain Description: DUF4917 Location: 2074063-2074987 bp Feature: domain Description: DUF4917 Location: 2 074063-2 074987 bp Feature: gene Location: 2076421-2078667 bp Ori: EQU58579.1 Feature: domain Description: AAA_15 Location: 2076424-2077432 bp Feature: domain Description: AAA_15 Location: 2 07642 4-2 077432 bp Feature: gene Location: 2078782-2079882 bp Ori: EQU58580.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2078962-2079496 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 078962 -2 079496 bp Feature: gene Location: 2080538-2081032 bp Ori: EQU58581.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 2080682-2080856 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 080682 -2 080856 bp Feature: gene Location: 2081404-2081655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)