myRT

myRT report for GCA_000459255.1_Esch_coli_HVH_210_4-3042480_V1

Download annotations/find similar RTs

Seq: KE700931.1 Escherichia coli HVH 210 (4-3042480) genomic scaffold acYzz-supercont1.5, whole genome shotgun sequence (559986 bp)
Overview 1 RT 1: 197483-202802 bp Neighborhood of RT #1 [197483, 202828] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 197483-198712 bp Ori: ERA85846.1 Feature: domain Description: YesM Location: 197963-198704 bp Feature: domain Description: YesM Location: 1 97963-1 98704 bp Feature: gene Location: 198785-198973 bp Feature: gene Location: 199295-199777 bp Ori: ERA85848.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199304-199544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 99304-1 99544 bp Feature: domain Description: GIIM Note: maturase Location: 199592-199772 bp Feature: domain Description: GIIM Note: maturase Location: 1 99592-1 99772 bp Feature: gene Location: 199844-200383 bp Ori: ERA85849.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200174-200252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2001 74-200252 bp Feature: gene Location: 200869-201774 bp Feature: gene Location: 201911-202828 bp Ori: ERA85851.1 Feature: domain Description: PFLE_PFLC Location: 201947-202802 bp Feature: domain Description: PFLE_PFLC Location: 201 947-202802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)

Seq: KE700935.1 Escherichia coli HVH 210 (4-3042480) genomic scaffold acYzz-supercont1.9, whole genome shotgun sequence (114230 bp)
Overview 1 RT 1: 1-2279 bp 2 RT 2: 97230-102984 bp Neighborhood of RT #1 [1, 2287] RVT-GII PRK10173 PRK10173 Neighborhood of RT #2 [97230, 103004] InsE PHA02517 RVT-GII GIIM rve PRK08181 Feature: gene Location: 1-409 bp Feature: gene Location: 1001-1504 bp Ori: ERA84521.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274-1346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 74-1346 bp Feature: gene Location: 1543-1863 bp Ori: ERA84522.1 Feature: domain Description: PRK10173 Location: 1546-1774 bp Feature: domain Description: PRK10173 Location: 1546-1774 bp Feature: gene Location: 1838-2287 bp Ori: ERA84523.1 Feature: domain Description: PRK10173 Location: 1841-2279 bp Feature: domain Description: PRK10173 Location: 1841-2 2 79 bp Feature: gene Location: 97230-97634 bp Ori: ERA84631.1 Feature: domain Description: InsE Location: 97260-97596 bp Feature: domain Description: InsE Location: 972 60-97596 bp Feature: gene Location: 97663-98019 bp Ori: ERA84632.1 Feature: domain Description: PHA02517 Location: 97666-97975 bp Feature: domain Description: PHA02 517 Location: 97666-97975 bp Feature: gene Location: 98136-99659 bp Ori: ERA84633.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98409-99141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98409-99141 bp Feature: domain Description: GIIM Note: maturase Location: 99216-99414 bp Feature: domain Description: GIIM Note: maturase Location: 992 16-99414 bp Feature: gene Location: 100753-102252 bp Ori: ERA84634.1 Feature: domain Description: rve Location: 101125-101518 bp Feature: domain Description: rve Location: 10112 5-101518 bp Feature: gene Location: 102249-103004 bp Ori: ERA84635.1 Feature: domain Description: PRK08181 Location: 102273-102984 bp Feature: domain Description: PRK08181 Location: 102 2 73-102 984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), rve (pfam00665), PRK08181 (transposase; Validated)