myRT

myRT report for GCA_000459835.1_Esch_coli_KOEGE_70_185a_V1

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Seq: KE701374.1 Escherichia coli KOEGE 70 (185a) genomic scaffold acYzD-supercont1.5, whole genome shotgun sequence (405975 bp)
Overview 1 RT 1: 100353-104877 bp Neighborhood of RT #1 [100353, 105026] HTH_33 DDE_3 RVT-AbiP2 PRK09183 COG4584 Feature: gene Location: 100353-100739 bp Feature: gene Location: 100815-101714 bp Ori: EQV83066.1 Feature: domain Description: HTH_33 Location: 100977-101139 bp Feature: domain Description: HTH_33 Location: 1 00977-1 01 1 39 bp Feature: domain Description: DDE_3 Location: 101181-101610 bp Feature: domain Description: DDE_3 Location: 1 01 1 81 -1 01 61 0 bp Feature: gene Location: 101816-103186 bp Ori: EQV83067.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 102077-102533 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 02077-1 02533 bp Feature: gene Location: 103225-104004 bp Ori: EQV83068.1 Feature: domain Description: PRK09183 Location: 103231-104002 bp Feature: domain Description: PRK091 83 Location: 1 03231 -1 04002 bp Feature: gene Location: 104004-105026 bp Ori: EQV83069.1 Feature: domain Description: COG4584 Location: 104007-104877 bp Feature: domain Description: COG4584 Location: 1 04007-1 04877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )

Seq: KE701367.1 Escherichia coli KOEGE 70 (185a) genomic scaffold acYzD-supercont1.12, whole genome shotgun sequence (115449 bp)
Overview 1 RT 1: 1-1045 bp 2 RT 2: 98709-104463 bp Neighborhood of RT #1 [1, 1053] RVT-GII PRK10173 PRK10173 Neighborhood of RT #2 [98709, 104483] InsE PHA02517 RVT-GII GIIM rve PRK08181 Feature: gene Location: 1-270 bp Ori: EQV75362.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-109 bp Feature: gene Location: 309-629 bp Ori: EQV75363.1 Feature: domain Description: PRK10173 Location: 312-540 bp Feature: domain Description: PRK10173 Location: 312 -540 bp Feature: gene Location: 604-1053 bp Ori: EQV75364.1 Feature: domain Description: PRK10173 Location: 607-1045 bp Feature: domain Description: PRK10173 Location: 607-1045 bp Feature: gene Location: 98709-99113 bp Ori: EQV75476.1 Feature: domain Description: InsE Location: 98739-99075 bp Feature: domain Description: InsE Location: 98739-99075 bp Feature: gene Location: 99142-99498 bp Ori: EQV75477.1 Feature: domain Description: PHA02517 Location: 99145-99454 bp Feature: domain Description: PHA02 517 Location: 99145-99454 bp Feature: gene Location: 99615-101138 bp Ori: EQV75478.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99888-100620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99888-10062 0 bp Feature: domain Description: GIIM Note: maturase Location: 100695-100893 bp Feature: domain Description: GIIM Note: maturase Location: 100695-100893 bp Feature: gene Location: 102232-103731 bp Ori: EQV75479.1 Feature: domain Description: rve Location: 102604-102997 bp Feature: domain Description: rve Location: 102 604-102 997 bp Feature: gene Location: 103728-104483 bp Ori: EQV75480.1 Feature: domain Description: PRK08181 Location: 103752-104463 bp Feature: domain Description: PRK08181 Location: 103752 -104463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), rve (pfam00665), PRK08181 (transposase; Validated)