myRT

myRT report for GCA_000459975.1_Esch_coli_UMEA_3022-1_V1

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Seq: KE701438.1 Escherichia coli UMEA 3022-1 genomic scaffold acYzv-supercont1.3, whole genome shotgun sequence (1902837 bp)
Overview 1 RT 1: 99252-106881 bp Neighborhood of RT #1 [99252, 107345] HTH_33 DDE_3 RVT-AbiP2 Arm-DNA-bind_3 Feature: gene Location: 99252-99638 bp Feature: gene Location: 99714-100613 bp Ori: EQW18172.1 Feature: domain Description: HTH_33 Location: 99876-100038 bp Feature: domain Description: HTH_33 Location: 99876-1 00038 bp Feature: domain Description: DDE_3 Location: 100080-100509 bp Feature: domain Description: DDE_3 Location: 1 00080-1 00509 bp Feature: gene Location: 100715-102253 bp Ori: EQW18173.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101144-101600 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 01 1 44-1 01 600 bp Feature: gene Location: 102476-106327 bp Feature: gene Location: 106596-107345 bp Ori: EQW18175.1 Feature: domain Description: Arm-DNA-bind_3 Location: 106626-106881 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 06626-1 06881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, Arm-DNA-bind_3 (pfam13356)

Seq: KE701439.1 Escherichia coli UMEA 3022-1 genomic scaffold acYzv-supercont1.4, whole genome shotgun sequence (310260 bp)
Overview 1 RT 1: 186439-190822 bp Neighborhood of RT #1 [186439, 190822] TraD PRK13889 RVT-Retrons HTH_XRE Feature: gene Location: 186439-186750 bp Ori: EQW12933.1 Feature: domain Description: TraD Location: 186553-186727 bp Feature: domain Description: TraD Location: 186553-18672 7 bp Feature: gene Location: 187563-189065 bp Ori: EQW12934.1 Feature: domain Description: PRK13889 Location: 187566-188148 bp Feature: domain Description: PRK13889 Location: 187566-188148 bp Feature: gene Location: 189142-190242 bp Ori: EQW12935.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 189283-189835 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1892 83-189835 bp Feature: gene Location: 190235-190516 bp Ori: EQW12936.1 Feature: domain Description: HTH_XRE Location: 190250-190415 bp Feature: domain Description: HTH_XRE Location: 1902 50-190415 bp Feature: gene Location: 190607-190822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, HTH_XRE (smart00530)