myRT

myRT report for GCA_000460215.1_Esch_coli_UMEA_3121-1_V1

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Seq: KE701599.1 Escherichia coli UMEA 3121-1 genomic scaffold acYwR-supercont1.8, whole genome shotgun sequence (29863 bp)
Overview 1 RT 1: 371-2708 bp Neighborhood of RT #1 [371, 2708] RVT-GII InsE Feature: gene Location: 371-583 bp Feature: gene Location: 995-1336 bp Feature: gene Location: 1509-1778 bp Ori: EQW72145.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1614-1704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 4-1 704 bp Feature: gene Location: 1984-2196 bp Ori: EQW72146.1 Feature: domain Description: InsE Location: 1996-2173 bp Feature: domain Description: InsE Location: 1 996-21 73 bp Feature: gene Location: 2328-2708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963)

Seq: KE701597.1 Escherichia coli UMEA 3121-1 genomic scaffold acYwR-supercont1.6, whole genome shotgun sequence (1169100 bp)
Overview 1 RT 1: 426438-431350 bp Neighborhood of RT #1 [426438, 431350] COG4584 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM rve Feature: gene Location: 426438-427181 bp Ori: EQW75676.1 Feature: domain Description: COG4584 Location: 426441-427032 bp Feature: domain Description: COG4584 Location: 42 6441-42 7032 bp Feature: gene Location: 427245-428426 bp Ori: EQW75677.1 Feature: domain Description: zf-IS66 Location: 427371-427503 bp Feature: domain Description: zf-IS66 Location: 42 7371-42 7503 bp Feature: domain Description: DDE_Tnp_IS66 Location: 427548-428385 bp Feature: domain Description: DDE_Tnp_IS66 Location: 42 7548-42 8385 bp Feature: gene Location: 428888-430120 bp Ori: EQW75678.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429089-429743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 9089-42 9743 bp Feature: domain Description: GIIM Note: maturase Location: 429821-430043 bp Feature: domain Description: GIIM Note: maturase Location: 42 982 1-430043 bp Feature: gene Location: 430458-431150 bp Ori: EQW75679.1 Feature: domain Description: rve Location: 430593-430959 bp Feature: domain Description: rve Location: 430593-430959 bp Feature: gene Location: 431174-431350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), rve (pfam00665)