myRT

myRT report for GCA_000460955.1_Esch_coli_UMEA_3222-1_V1

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Seq: KE702148.1 Escherichia coli UMEA 3222-1 genomic scaffold acYzG-supercont1.8, whole genome shotgun sequence (472477 bp)
Overview 1 RT 1: 423336-428248 bp Neighborhood of RT #1 [423336, 428248] COG4584 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM rve Feature: gene Location: 423336-424079 bp Ori: EQY39416.1 Feature: domain Description: COG4584 Location: 423339-423930 bp Feature: domain Description: COG4584 Location: 423339-423930 bp Feature: gene Location: 424143-425324 bp Ori: EQY39417.1 Feature: domain Description: zf-IS66 Location: 424269-424401 bp Feature: domain Description: zf-IS66 Location: 424269-424401 bp Feature: domain Description: DDE_Tnp_IS66 Location: 424446-425283 bp Feature: domain Description: DDE_Tnp_IS66 Location: 424446-425283 bp Feature: gene Location: 425786-427018 bp Ori: EQY39418.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425987-426641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425987-426641 bp Feature: domain Description: GIIM Note: maturase Location: 426719-426941 bp Feature: domain Description: GIIM Note: maturase Location: 42671 9-426941 bp Feature: gene Location: 427356-428048 bp Ori: EQY39419.1 Feature: domain Description: rve Location: 427491-427857 bp Feature: domain Description: rve Location: 427491 -427857 bp Feature: gene Location: 428072-428248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), rve (pfam00665)

Seq: KE702131.1 Escherichia coli UMEA 3222-1 genomic scaffold acYzG-supercont1.14, whole genome shotgun sequence (36610 bp)
Overview 1 RT 1: 7511-9847 bp Neighborhood of RT #1 [7511, 9847] RVT-GII InsE Feature: gene Location: 7511-7723 bp Feature: gene Location: 8134-8475 bp Feature: gene Location: 8648-8917 bp Ori: EQY35689.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8753-8843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8753-8843 bp Feature: gene Location: 9123-9335 bp Ori: EQY35690.1 Feature: domain Description: InsE Location: 9135-9312 bp Feature: domain Description: InsE Location: 9135-9312 bp Feature: gene Location: 9467-9847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963)