myRT

myRT report for GCA_000461375.1_Esch_coli_UMEA_3585-1_V1

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Seq: KE702411.1 Escherichia coli UMEA 3585-1 genomic scaffold acYzp-supercont1.1, whole genome shotgun sequence (2205237 bp)
Overview 1 RT 1: 104103-108627 bp Neighborhood of RT #1 [104103, 108776] HTH_33 DDE_3 RVT-AbiP2 PRK09183 COG4584 Feature: gene Location: 104103-104489 bp Feature: gene Location: 104565-105464 bp Ori: EQZ32219.1 Feature: domain Description: HTH_33 Location: 104727-104889 bp Feature: domain Description: HTH_33 Location: 1 04727-1 04889 bp Feature: domain Description: DDE_3 Location: 104931-105360 bp Feature: domain Description: DDE_3 Location: 1 04931 -1 05360 bp Feature: gene Location: 105566-106936 bp Ori: EQZ32220.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 105827-106283 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 05827-1 06283 bp Feature: gene Location: 106975-107754 bp Ori: EQZ32221.1 Feature: domain Description: PRK09183 Location: 106981-107752 bp Feature: domain Description: PRK091 83 Location: 1 06981 -1 07752 bp Feature: gene Location: 107754-108776 bp Ori: EQZ32222.1 Feature: domain Description: COG4584 Location: 107757-108627 bp Feature: domain Description: COG4584 Location: 1 07757-1 08627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )