myRT

myRT report for GCA_000461435.1_Esch_coli_UMEA_3617-1_V1

Download annotations/find similar RTs

Seq: KE702449.1 Escherichia coli UMEA 3617-1 genomic scaffold acYyX-supercont1.6, whole genome shotgun sequence (395755 bp)
Overview 1 RT 1: 104349-108873 bp Neighborhood of RT #1 [104349, 109022] HTH_33 DDE_3 RVT-AbiP2 PRK09183 COG4584 Feature: gene Location: 104349-104735 bp Feature: gene Location: 104811-105710 bp Ori: EQZ38447.1 Feature: domain Description: HTH_33 Location: 104973-105135 bp Feature: domain Description: HTH_33 Location: 1 04973-1 051 35 bp Feature: domain Description: DDE_3 Location: 105177-105606 bp Feature: domain Description: DDE_3 Location: 1 051 77-1 05606 bp Feature: gene Location: 105812-107182 bp Ori: EQZ38448.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 106073-106529 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 06073-1 06529 bp Feature: gene Location: 107221-108000 bp Ori: EQZ38449.1 Feature: domain Description: PRK09183 Location: 107227-107998 bp Feature: domain Description: PRK091 83 Location: 1 07227-1 07998 bp Feature: gene Location: 108000-109022 bp Ori: EQZ38450.1 Feature: domain Description: COG4584 Location: 108003-108873 bp Feature: domain Description: COG4584 Location: 1 08003-1 08873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )