myRT

myRT report for GCA_000461795.1_Esch_coli_UMEA_3899-1_V1

Download annotations/find similar RTs

Seq: KE702686.1 Escherichia coli UMEA 3899-1 genomic scaffold acYxE-supercont1.4, whole genome shotgun sequence (1222046 bp)
Overview 1 RT 1: 388595-392477 bp Neighborhood of RT #1 [388595, 392482] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 388595-389053 bp Feature: domain Description: dut Location: 388601-389048 bp Feature: domain Description: dut Location: 388601 -389048 bp Feature: gene Location: 389160-389756 bp Feature: domain Description: slmA Location: 389166-389742 bp Feature: domain Description: slmA Location: 3891 66-389742 bp Feature: gene Location: 389802-390761 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 389937-390486 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 389937-390486 bp Feature: gene Location: 391059-391700 bp Feature: domain Description: pyrE Location: 391062-391695 bp Feature: domain Description: pyrE Location: 391 062-391 695 bp Feature: gene Location: 391766-392482 bp Feature: domain Description: rph Location: 391769-392477 bp Feature: domain Description: rph Location: 391 769-392477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: KE702685.1 Escherichia coli UMEA 3899-1 genomic scaffold acYxE-supercont1.36, whole genome shotgun sequence (2325 bp)
Overview 1 RT 1: 146-1424 bp Neighborhood of RT #1 [146, 1669] RVT-GII GIIM Feature: gene Location: 146-1669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1151 bp Feature: domain Description: GIIM Note: maturase Location: 1226-1424 bp Feature: domain Description: GIIM Note: maturase Location: 12 2 6-142 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KE702680.1 Escherichia coli UMEA 3899-1 genomic scaffold acYxE-supercont1.31, whole genome shotgun sequence (2306 bp)
Overview 1 RT 1: 103-1381 bp Neighborhood of RT #1 [103, 1626] RVT-GII GIIM Feature: gene Location: 103-1626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 76-1108 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1183 -13 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)