myRT

myRT report for GCA_000464155.2_ASM46415v2

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Seq: AUOJ02000017.1 Bradyrhizobium sp. JGI 0001002-A22 C858DRAFT_contig_16.17_C, whole genome shotgun sequence (31776 bp)
Overview 1 RT 1: 26977-31641 bp Neighborhood of RT #1 [26977, 31736] AcyC TolBN TPR TPR AmpC RVT-GII GIIM Feature: gene Location: 26977-28695 bp Feature: domain Description: AcyC Location: 26983-27466 bp Feature: domain Description: AcyC Location: 26983-27466 bp Feature: domain Description: TolBN Location: 27493-27895 bp Feature: domain Description: TolBN Location: 27493-27895 bp Feature: domain Description: TPR Location: 28228-28399 bp Feature: domain Description: TPR Location: 28228-28399 bp Feature: domain Description: TPR Location: 28411-28591 bp Feature: domain Description: TPR Location: 2841 1 -28591 bp Feature: gene Location: 29021-30274 bp Feature: domain Description: AmpC Location: 29357-30194 bp Feature: domain Description: AmpC Location: 29357-301 94 bp Feature: gene Location: 30414-31736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30702-31359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30702-31 359 bp Feature: domain Description: GIIM Note: maturase Location: 31428-31641 bp Feature: domain Description: GIIM Note: maturase Location: 31 428-31 641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcyC (COG2114), TolBN (COG5616), TPR (smart00028), AmpC (COG1680), RVT-GII, GIIM (pfam08388)

Seq: AUOJ02000001.1 Bradyrhizobium sp. JGI 0001002-A22 C858DRAFT_contig_0.1_C, whole genome shotgun sequence (302690 bp)
Overview 1 RT 1: 296872-302555 bp Neighborhood of RT #1 [296872, 302650] TorS_sensor_domain Tar TTHA1429-like_MBL-fold RVT-GII GIIM Feature: gene Location: 296872-298998 bp Feature: domain Description: TorS_sensor_domain Location: 297067-297364 bp Feature: domain Description: TorS_sensor_domain Location: 2 97067-2 97364 bp Feature: domain Description: Tar Location: 297742-298975 bp Feature: domain Description: Tar Location: 2 97742 -2 98975 bp Feature: gene Location: 299142-300203 bp Feature: domain Description: TTHA1429-like_MBL-fold Location: 299256-299967 bp Feature: domain Description: TTHA142 9-like_MBL-fold Location: 2 992 56-2 99967 bp Feature: gene Location: 301328-302650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301616-302273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301616-302 2 73 bp Feature: domain Description: GIIM Note: maturase Location: 302342-302555 bp Feature: domain Description: GIIM Note: maturase Location: 302 342 -302 555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TorS_sensor_domain (cd16172), Tar (COG0840), TTHA1429-like_MBL-fold (cd07725), RVT-GII, GIIM (pfam08388)