myRT

myRT report for GCA_000465695.1_Leg01_53

Download annotations/find similar RTs

Seq: AVOW01000080.1 Legionella pneumophila str. Leg01/53 Leg01_53_c75, whole genome shotgun sequence (24418 bp)
Overview 1 RT 1: 15544-19867 bp Neighborhood of RT #1 [15544, 19867] PepSY_2 PepSY_2 RVT_N RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 15544-15777 bp Feature: gene Location: 15817-16263 bp Ori: ERH41389.1 Feature: domain Description: PepSY_2 Location: 15892-16069 bp Feature: domain Description: PepSY_2 Location: 1 5892-1 6069 bp Feature: domain Description: PepSY_2 Location: 16111-16249 bp Feature: domain Description: PepSY_2 Location: 1 61 1 1 -1 6249 bp Feature: gene Location: 17147-18631 bp Ori: ERH41390.1 Feature: domain Description: RVT_N Location: 17201-17444 bp Feature: domain Description: RVT_N Location: 1 7201 -1 7444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17489-18110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7489-1 81 1 0 bp Feature: domain Description: GIIM Note: maturase Location: 18167-18401 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 67-1 8401 bp Feature: gene Location: 19409-19681 bp Ori: ERH41391.1 Feature: domain Description: DDE_Tnp_1 Location: 19412-19676 bp Feature: domain Description: DDE_Tnp_1 Location: 1 941 2-1 9676 bp Feature: gene Location: 19712-19867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepSY_2 (pfam13670), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)

Seq: AVOW01000060.1 Legionella pneumophila str. Leg01/53 Leg01_53_c57, whole genome shotgun sequence (24635 bp)
Overview 1 RT 1: 21311-23538 bp Neighborhood of RT #1 [21311, 24635] DUF5338 RVT-UG5 Feature: gene Location: 21311-21502 bp Feature: gene Location: 21830-22195 bp Ori: ERH42064.1 Feature: domain Description: DUF5338 Location: 21839-22046 bp Feature: domain Description: DUF5338 Location: 2 1839-2 2 046 bp Feature: gene Location: 22500-24635 bp Ori: ERH42065.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23010-23538 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 3010-2 3538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5