myRT

myRT report for GCA_000465915.1_Leg01_20

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Seq: AWES01000048.1 Legionella pneumophila str. Leg01/20 Leg01_20_c52, whole genome shotgun sequence (22665 bp)
Overview 1 RT 1: 4710-8848 bp Neighborhood of RT #1 [4710, 8848] DDE_Tnp_1 RVT_N RVT-GII GIIM PepSY_2 PepSY_2 Feature: gene Location: 4710-5087 bp Ori: ERI46793.1 Feature: domain Description: DDE_Tnp_1 Location: 4716-5022 bp Feature: domain Description: DDE_Tnp_1 Location: 471 6-5022 bp Feature: gene Location: 5381-5527 bp Feature: gene Location: 5762-7246 bp Ori: ERI46795.1 Feature: domain Description: RVT_N Location: 5816-6059 bp Feature: domain Description: RVT_N Location: 581 6-6059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6104-6725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 04-6725 bp Feature: domain Description: GIIM Note: maturase Location: 6782-7016 bp Feature: domain Description: GIIM Note: maturase Location: 6782-701 6 bp Feature: gene Location: 8129-8575 bp Ori: ERI46796.1 Feature: domain Description: PepSY_2 Location: 8204-8381 bp Feature: domain Description: PepSY_2 Location: 8204-8381 bp Feature: domain Description: PepSY_2 Location: 8423-8561 bp Feature: domain Description: PepSY_2 Location: 8423-8561 bp Feature: gene Location: 8615-8848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PepSY_2 (pfam13670)

Seq: AWES01000011.1 Legionella pneumophila str. Leg01/20 Leg01_20_c19, whole genome shotgun sequence (82308 bp)
Overview 1 RT 1: 22615-28918 bp Neighborhood of RT #1 [22615, 28935] DUF5338 RVT-UG5 Arm-DNA-bind_3 INT_P4_C Gp49 Feature: gene Location: 22615-22806 bp Feature: gene Location: 23134-23499 bp Ori: ERI48690.1 Feature: domain Description: DUF5338 Location: 23143-23350 bp Feature: domain Description: DUF5338 Location: 2 3143-2 3350 bp Feature: gene Location: 23804-26893 bp Ori: ERI48691.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24314-24842 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 4314-2 4842 bp Feature: gene Location: 27308-28528 bp Ori: ERI48638.1 Feature: domain Description: Arm-DNA-bind_3 Location: 27317-27569 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 7317-2 7569 bp Feature: domain Description: INT_P4_C Location: 27923-28454 bp Feature: domain Description: INT_P4_C Location: 2 792 3-2 8454 bp Feature: gene Location: 28612-28935 bp Ori: ERI48639.1 Feature: domain Description: Gp49 Location: 28660-28918 bp Feature: domain Description: Gp49 Location: 2 8660-2 8918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), Gp49 (pfam05973)