myRT

myRT report for GCA_000466485.1_ASM46648v1

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Seq: KE992944.1 Clostridium symbiosum ATCC 14940 genomic scaffold Scaffold352, whole genome shotgun sequence (2507 bp)
Overview 1 RT 1: 131-1910 bp Neighborhood of RT #1 [131, 1930] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 131-1930 bp Ori: ERI78107.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401-1214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401 -1 21 4 bp Feature: domain Description: Intron_maturas2 Location: 1295-1586 bp Feature: domain Description: Intron_maturas2 Location: 1 295-1 586 bp Feature: domain Description: HNHc Note: nucleases Location: 1754-1910 bp Feature: domain Description: HNHc Note: nucleases Location: 1 754-1 91 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: KE993035.1 Clostridium symbiosum ATCC 14940 genomic scaffold Scaffold818, whole genome shotgun sequence (2109 bp)
Overview 1 RT 1: 1-2109 bp Neighborhood of RT #1 [1, 2109] RVT-GII Feature: gene Location: 1-1262 bp Feature: gene Location: 1389-1535 bp Feature: gene Location: 1755-2109 bp Ori: ERI75833.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2022-2109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 02 2 -2 109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KE992942.1 Clostridium symbiosum ATCC 14940 genomic scaffold Scaffold348, whole genome shotgun sequence (1202 bp)
Overview 1 RT 1: 1-1057 bp Neighborhood of RT #1 [1, 1125] RVT-GII GIIM Feature: gene Location: 1-1125 bp Ori: ERI78118.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85-772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85-772 bp Feature: domain Description: GIIM Note: maturase Location: 850-1057 bp Feature: domain Description: GIIM Note: maturase Location: 850-1057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KE993042.1 Clostridium symbiosum ATCC 14940 genomic scaffold Scaffold849, whole genome shotgun sequence (2151 bp)
Overview 1 RT 1: 1395-2151 bp Neighborhood of RT #1 [1395, 2151] RVT-GII Feature: gene Location: 1395-1553 bp Feature: gene Location: 1639-1761 bp Feature: gene Location: 1797-2151 bp Ori: ERI75633.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2064-2151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2064 -2151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KE993003.1 Clostridium symbiosum ATCC 14940 genomic scaffold Scaffold608, whole genome shotgun sequence (19373 bp)
Overview 1 RT 1: 1755-7117 bp Neighborhood of RT #1 [1755, 7117] Flavodoxin_3 RVT-GII GIIM MrcB MrcB Feature: gene Location: 1755-2327 bp Ori: ERI76366.1 Feature: domain Description: Flavodoxin_3 Location: 1767-2289 bp Feature: domain Description: Flavodoxin_3 Location: 1767-2289 bp Feature: gene Location: 2335-2520 bp Feature: gene Location: 2868-4259 bp Ori: ERI76368.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3183-3810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3183-3810 bp Feature: domain Description: GIIM Note: maturase Location: 3864-4092 bp Feature: domain Description: GIIM Note: maturase Location: 3864-4092 bp Feature: gene Location: 4336-6900 bp Ori: ERI76369.1 Feature: domain Description: MrcB Location: 4408-5320 bp Feature: domain Description: MrcB Location: 4408-5 320 bp Feature: domain Description: MrcB Location: 5491-6475 bp Feature: domain Description: MrcB Location: 5 491-6475 bp Feature: gene Location: 6980-7117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Flavodoxin_3 (pfam12641), RVT-GII, GIIM (pfam08388), MrcB (COG0744)

Seq: KE992910.1 Clostridium symbiosum ATCC 14940 genomic scaffold Scaffold2669, whole genome shotgun sequence (26499 bp)
Overview 1 RT 1: 21200-26499 bp Neighborhood of RT #1 [21200, 26499] MviM MviM LysR RVT-Retrons YuiF Feature: gene Location: 21200-22384 bp Ori: ERI73547.1 Feature: domain Description: MviM Location: 21221-21518 bp Feature: domain Description: MviM Location: 21221-21518 bp Feature: domain Description: MviM Location: 21593-22376 bp Feature: domain Description: MviM Location: 21593-22376 bp Feature: gene Location: 22706-23650 bp Ori: ERI73548.1 Feature: domain Description: LysR Location: 22745-23603 bp Feature: domain Description: LysR Location: 22745-236 03 bp Feature: gene Location: 23698-24684 bp Ori: ERI73549.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23863-24418 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2386 3-24418 bp Feature: gene Location: 24982-26304 bp Ori: ERI73550.1 Feature: domain Description: YuiF Location: 25003-26302 bp Feature: domain Description: YuiF Location: 25003-26 302 bp Feature: gene Location: 26357-26499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), LysR (COG0583), RVT-Retrons, YuiF (COG2056)