myRT

myRT report for GCA_000466605.1_ASM46660v1

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Seq: KE993539.1 Clostridium sp. ATCC 29733 genomic scaffold Scaffold15, whole genome shotgun sequence (63129 bp)
Overview 1 RT 1: 8030-14138 bp Neighborhood of RT #1 [8030, 14176] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 RVT-GII VirD4 DUF3801 Feature: gene Location: 8030-9910 bp Feature: domain Description: SR_TndX_transposase Location: 8054-8462 bp Feature: domain Description: SR_TndX_transposase Location: 8054-8462 bp Feature: domain Description: Recombinase Location: 8561-8921 bp Feature: domain Description: Recombinase Location: 8561 -8921 bp Feature: domain Description: Zn_ribbon_recom Location: 8966-9149 bp Feature: domain Description: Zn_ribbon_recom Location: 8966-91 49 bp Feature: domain Description: DUF4368 Location: 9434-9620 bp Feature: domain Description: DUF4368 Location: 9434-9620 bp Feature: gene Location: 9960-10232 bp Feature: gene Location: 10362-12209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10632-11376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0632-1 1 376 bp Feature: gene Location: 12894-13697 bp Feature: domain Description: VirD4 Location: 13146-13635 bp Feature: domain Description: VirD4 Location: 1 31 46-1 3635 bp Feature: gene Location: 13694-14176 bp Feature: domain Description: DUF3801 Location: 13772-14138 bp Feature: domain Description: DUF3801 Location: 1 3772-1 41 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, VirD4 (COG3505), DUF3801 (pfam12687), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)