myRT

myRT report for GCA_000467895.1_ASM46789v1

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Seq: KI259649.1 Prevotella sp. F0091 genomic scaffold Scaffold991, whole genome shotgun sequence (871 bp)
Overview 1 RT 1: 1-730 bp Neighborhood of RT #1 [1, 871] RVT-GII Feature: gene Location: 1-871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 2-730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KI259565.1 Prevotella sp. F0091 genomic scaffold Scaffold1576, whole genome shotgun sequence (50497 bp)
Overview 1 RT 1: 44989-49022 bp Neighborhood of RT #1 [44989, 49022] DUF4141 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Feature: gene Location: 44989-45547 bp Feature: domain Description: DUF4141 Location: 45004-45157 bp Feature: domain Description: DUF4141 Location: 45004-45157 bp Feature: gene Location: 45575-46039 bp Feature: domain Description: Bac_Flav_CT_G Location: 45593-46016 bp Feature: domain Description: Bac_Flav_CT_G Location: 45593-46016 bp Feature: gene Location: 46117-47928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46381-47203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46381-472 03 bp Feature: domain Description: Intron_maturas2 Location: 47287-47602 bp Feature: domain Description: Intron_maturas2 Location: 472 87-47602 bp Feature: domain Description: HNHc Note: nucleases Location: 47749-47899 bp Feature: domain Description: HNHc Note: nucleases Location: 47749-47899 bp Feature: gene Location: 48274-48447 bp Feature: gene Location: 48475-49022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: KI259534.1 Prevotella sp. F0091 genomic scaffold Scaffold115, whole genome shotgun sequence (50789 bp)
Overview 1 RT 1: 1160-5876 bp Neighborhood of RT #1 [1160, 5881] RpoE RVT-Retrons PRK07101 PRK07093 Feature: gene Location: 1160-1768 bp Feature: gene Location: 1889-2383 bp Feature: domain Description: RpoE Location: 1904-2369 bp Feature: domain Description: RpoE Location: 1904-23 69 bp Feature: gene Location: 2827-4152 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3034-3616 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 03 4-3 616 bp Feature: gene Location: 4315-4908 bp Feature: domain Description: PRK07101 Location: 4318-4870 bp Feature: domain Description: PRK07101 Location: 43 18-4870 bp Feature: gene Location: 4892-5881 bp Feature: domain Description: PRK07093 Location: 4913-5876 bp Feature: domain Description: PRK07093 Location: 4913 -5876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoE (COG3343), RVT-Retrons, PRK07101 (hypothetical protein; Provisional), PRK07093 (para-aminobenzoate synthase component I; Validated)