myRT

myRT report for GCA_000468095.1_Pantoea_sp._AS-PWVM4

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Seq: ASZC01000018.1 Pantoea sp. AS-PWVM4 contig18, whole genome shotgun sequence (168650 bp)
Overview 1 RT 1: 21411-25937 bp Neighborhood of RT #1 [21411, 25937] DUF905 RVT_N RVT-GII GIIM HNHc YiaG Feature: gene Location: 21411-21560 bp Feature: gene Location: 21645-22184 bp Feature: domain Description: DUF905 Location: 21696-21900 bp Feature: domain Description: DUF905 Location: 21 696-21 900 bp Feature: gene Location: 23281-24933 bp Feature: RT Description: RVT_N Location: 23329-23569 bp Feature: RT Description: RVT_N Location: 23329-23569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23617-24244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2361 7-24244 bp Feature: domain Description: GIIM Note: maturase Location: 24295-24529 bp Feature: domain Description: GIIM Note: maturase Location: 24295-24529 bp Feature: domain Description: HNHc Note: nucleases Location: 24736-24898 bp Feature: domain Description: HNHc Note: nucleases Location: 24736-24898 bp Feature: gene Location: 25285-25599 bp Feature: domain Description: YiaG Location: 25294-25579 bp Feature: domain Description: YiaG Location: 25294-25579 bp Feature: gene Location: 25809-25937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), YiaG (COG2944)