myRT

myRT report for GCA_000468235.1_Legionella_pneumophila_Leg01_16

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Seq: AWQT01000016.1 Legionella pneumophila Leg01/16 Leg01_16_contig_356, whole genome shotgun sequence (6064 bp)
Overview 1 RT 1: 2-4096 bp Neighborhood of RT #1 [2, 4170] RVT-UG5 Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 2-2536 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8-485 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8-485 bp Feature: gene Location: 2632-2802 bp Feature: gene Location: 2908-4170 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2959-3211 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2959-321 1 bp Feature: domain Description: INT_P4_C Location: 3565-4096 bp Feature: domain Description: INT_P4_C Location: 3565-4096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)

Seq: AWQT01000516.1 Legionella pneumophila Leg01/16 Leg01_16_contig_93, whole genome shotgun sequence (7642 bp)
Overview 1 RT 1: 3910-7363 bp Neighborhood of RT #1 [3910, 7629] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Feature: gene Location: 3910-4287 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 3937-4273 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 3937-42 73 bp Feature: gene Location: 4587-6038 bp Feature: domain Description: Tnp_DNA_bind Location: 4626-4794 bp Feature: domain Description: Tnp_DNA_bind Location: 462 6-4794 bp Feature: domain Description: DDE_Tnp_1 Location: 5451-5745 bp Feature: domain Description: DDE_Tnp_1 Location: 5451-5745 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 5751-6030 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 5751-6030 bp Feature: gene Location: 6109-7629 bp Feature: domain Description: RVT_N Location: 6166-6409 bp Feature: domain Description: RVT_N Location: 6166-6409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6454-7078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6454-7078 bp Feature: domain Description: GIIM Note: maturase Location: 7129-7363 bp Feature: domain Description: GIIM Note: maturase Location: 712 9-7363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_MazG_Cterm (cd11529), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)